Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8f/5fde384af4578e5455860080289cbb/659_bQZ-T1-TRNA-1_B23MHV2LT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4d/32db5120d9d6a2ed3ca07c8bf7b453/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4d/32db5120d9d6a2ed3ca07c8bf7b453/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/63/36085d53c025ebf0d0c0471be0284b/659_bQZ-T1-TRNA-1_B23MHV2LT4_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_bQZ-T1-TRNA-1_B23MHV2LT4_1/abundance.h5
Successfully converted 659_bQZ-T1-TRNA-1_B23MHV2LT4_1/abundance.h5 to 659_bQZ-T1-TRNA-1_B23MHV2LT4_1_kallisto_mqc.tsv
  Sample: 659_bQZ-T1-TRNA-1_B23MHV2LT4_1
  Mean Fragment Length: 145.7 bp
  Median Fragment Length: 136.0 bp
  pct_mito_est_counts: 0.008%
  pct_ribo_est_counts: 1.535%
  pct_hk_est_counts: 0.624%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.018%
  pct_ribo_tpm: 4.612%
  pct_hk_tpm: 0.948%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.005%