Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/0078784d48dfcae81ce55a3a7751d1/659_eKx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2e/e492fb692ca9522cb4a7c670f5aecb/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2e/e492fb692ca9522cb4a7c670f5aecb/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory