AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 251
Pass (FILTER=PASS): 34 (13.5%)
Fail (FILTER=FAIL): 217 (86.5%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 66
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 30
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 9
confidence_below_min(low<high): 9
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 5
total_reads_below_min(3.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
Breakdown by confidence:
high: 34 pass, 6 fail (total: 40)
low: 0 pass, 85 fail (total: 85)
medium: 0 pass, 126 fail (total: 126)
Arriba filter: 251 rows -> 34 PASS; wrote 659_eZ4-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_eZ4-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_eZ4-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filter_summary.txt