Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/e57a5559f370ca70abd5eb60f2c516/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/10/918411341c4c7262634ab29c8857c1/659_d01-T1-TRNA-1_B23MHV2LT4_1.features.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/e57a5559f370ca70abd5eb60f2c516/.command.run
==> STAGING COMPLETE (3 inputs)

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  659_d01-T1-TRNA-1_B23MHV2LT4_1: vaf_p90=0.999027 -> CONTAMINATED (~0.0%)

Output saved to: 659_d01-T1-TRNA-1_B23MHV2LT4_1.predictions.csv
Summary: 1/1 samples flagged as contaminated