Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a2/f05be273ded2d3ccca1019155cce36/659_bUs-T1-TRNA-1_B23MHV2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fe/d2f17a411e9bf704ba5e49ac669b7e/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fe/d2f17a411e9bf704ba5e49ac669b7e/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory