File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/1a7e378d98aa55d117a34f70eb9995/.command.log
Size
732 bytes
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7d/b1c284df078d80c97d2705160371bb/659_bGW-T1-TRNA-1_B23MHV2LT4_1.features.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/1a7e378d98aa55d117a34f70eb9995/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/1a7e378d98aa55d117a34f70eb9995/.command.run
==> STAGING COMPLETE (3 inputs)

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  659_bGW-T1-TRNA-1_B23MHV2LT4_1: vaf_p90=0.999470 -> CONTAMINATED (~0.0%)

Output saved to: 659_bGW-T1-TRNA-1_B23MHV2LT4_1.predictions.csv
Summary: 1/1 samples flagged as contaminated