Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/91671bad91c2a8bcaebbf274ef4dad/659_Dl-T1-TRNA-1_B23MHV2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6a/791f6cc7a3b0ff095af6efa7e71e51/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6a/791f6cc7a3b0ff095af6efa7e71e51/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory