Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/eb/4d4cab6f0eb522d22d6cb9dbf49af3/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/79/02afeec573a0dda139e115dfab0ac3/659_bMa-T1-TRNA-1_B23MHV2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/eb/4d4cab6f0eb522d22d6cb9dbf49af3/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory