Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6e/5095ca24cc799e6d6e75cacc570c6b/659_bTq-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9e/6dc68ee7fa4419c5bd1a60095d41e8/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9e/6dc68ee7fa4419c5bd1a60095d41e8/.command.run
==> STAGING COMPLETE (3 inputs)

PAIRED_END_BAM_INPUT
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paired = 292052436
unpaired = 5119731
MERGED PAIRED END READS = 292052436
MATES PROCESSED = 589224603
TOTAL READS     = 297172167
DISTINCT READS  = 1.57136e+08
DISTINCT COUNTS = 955
MAX COUNT       = 1319182
COUNTS OF 1     = 1.02364e+08
MAX TERMS       = 100
OBSERVED COUNTS (1319183)
1	102364298
2	30611519
3	11136145
4	4900612
5	2526665
6	1472750
7	939437
8	642120
9	459609
10	342974
11	263602
12	206334
13	165007
14	135058
15	111391
16	93250
17	79050
18	67072
19	57424
20	50195
21	43328
22	38194
23	33850
24	29888
25	26599
26	23708
27	21404
28	19576
29	17289
30	15886
31	14394
32	13315
33	12342
34	11356
35	10125
36	9334
37	8765
38	8104
39	7626
40	6733
41	6558
42	6180
43	5770
44	5066
45	4859
46	4591
47	4356
48	4124
49	3840
50	3587
51	3472
52	3305
53	3151
54	2910
55	2789
56	2722
57	2494
58	2415
59	2296
60	2159
61	2066
62	1877
63	1908
64	1784
65	1662
66	1601
67	1548
68	1447
69	1431
70	1458
71	1300
72	1266
73	1211
74	1161
75	1064
76	1109
77	981
78	973
79	902
80	976
81	896
82	856
83	816
84	803
85	815
86	728
87	753
88	662
89	667
90	625
91	612
92	580
93	584
94	559
95	517
96	535
97	517
98	471
99	494
100	479
101	460
102	445
103	408
104	442
105	403
106	396
107	375
108	383
109	362
110	353
111	334
112	340
113	333
114	341
115	303
116	286
117	314
118	277
119	278
120	254
121	250
122	262
123	280
124	246
125	253
126	213
127	201
128	216
129	244
130	226
131	218
132	206
133	208
134	191
135	181
136	195
137	166
138	170
139	173
140	171
141	149
142	156
143	159
144	130
145	152
146	145
147	140
148	151
149	141
150	140
151	124
152	123
153	144
154	139
155	112
156	116
157	146
158	114
159	113
160	111
161	107
162	110
163	112
164	115
165	94
166	89
167	88
168	92
169	81
170	102
171	73
172	82
173	91
174	95
175	96
176	87
177	90
178	80
179	79
180	74
181	95
182	76
183	73
184	82
185	62
186	67
187	63
188	71
189	74
190	73
191	53
192	66
193	68
194	67
195	77
196	55
197	54
198	57
199	53
200	46
201	47
202	56
203	43
204	59
205	56
206	44
207	39
208	49
209	51
210	52
211	52
212	53
213	35
214	47
215	46
216	43
217	46
218	48
219	47
220	45
221	36
222	41
223	44
224	34
225	36
226	36
227	24
228	34
229	42
230	41
231	31
232	36
233	35
234	43
235	46
236	37
237	34
238	33
239	39
240	39
241	35
242	38
243	31
244	35
245	29
246	36
247	25
248	34
249	24
250	21
251	21
252	32
253	19
254	29
255	24
256	26
257	14
258	24
259	23
260	27
261	22
262	28
263	13
264	28
265	20
266	17
267	27
268	14
269	24
270	27
271	32
272	14
273	20
274	26
275	18
276	26
277	15
278	30
279	21
280	16
281	19
282	25
283	19
284	17
285	19
286	25
287	16
288	24
289	11
290	18
291	14
292	14
293	18
294	11
295	20
296	17
297	15
298	17
299	20
300	14
301	14
302	17
303	19
304	13
305	13
306	15
307	17
308	17
309	18
310	18
311	15
312	5
313	19
314	16
315	14
316	16
317	19
318	22
319	14
320	14
321	13
322	15
323	16
324	11
325	7
326	16
327	11
328	14
329	11
330	8
331	11
332	10
333	11
334	10
335	11
336	11
337	11
338	9
339	15
340	14
341	10
342	12
343	13
344	15
345	12
346	8
347	7
348	6
349	9
350	7
351	15
352	4
353	12
354	11
355	7
356	10
357	4
358	11
359	10
360	11
361	7
362	8
363	9
364	7
365	6
366	17
367	6
368	11
369	8
370	9
371	3
372	5
373	7
374	15
375	7
376	6
377	9
378	15
379	14
380	5
381	4
382	3
383	5
384	2
385	12
386	8
387	8
388	6
389	4
390	10
391	7
392	9
393	7
394	7
395	5
396	7
397	1
398	5
399	4
400	2
401	7
402	9
403	8
404	6
405	8
406	4
407	4
408	7
409	6
410	4
411	7
412	10
413	8
415	9
416	8
417	8
418	7
419	4
420	7
421	3
422	4
423	3
424	3
425	4
426	9
427	5
428	9
429	5
430	5
431	4
432	6
433	2
434	2
435	10
436	8
437	1
438	7
439	1
440	3
441	9
442	8
443	4
444	1
445	6
446	11
447	5
448	6
449	1
450	4
451	2
452	5
453	3
454	13
455	4
456	1
457	1
458	6
459	5
460	4
461	7
462	5
463	5
465	3
466	3
467	7
468	2
469	3
470	4
471	6
472	4
473	2
475	4
476	5
477	2
478	3
479	3
480	5
481	4
482	6
483	4
484	3
485	4
486	1
487	1
488	6
489	1
490	2
491	2
492	2
494	1
495	4
496	5
497	3
498	6
499	3
500	1
501	7
502	4
503	1
504	1
505	6
506	3
507	2
508	2
509	2
510	4
511	7
512	2
513	2
514	3
515	4
516	5
517	6
518	2
519	1
520	3
521	2
522	5
523	1
524	5
525	3
526	5
527	3
528	4
530	2
531	2
532	2
533	4
535	1
536	4
537	2
538	3
540	4
541	1
542	1
543	1
544	4
545	5
546	3
547	2
548	4
549	3
550	5
551	2
552	3
553	1
554	4
555	3
556	4
558	2
559	3
560	1
561	3
562	2
564	3
566	1
567	1
568	3
569	2
570	2
571	2
573	4
574	1
575	2
577	2
578	3
579	1
580	3
582	2
583	2
584	1
585	1
586	3
587	3
588	3
590	1
592	2
594	3
595	4
597	2
600	4
601	1
602	2
603	4
604	2
605	2
606	2
608	2
609	2
611	1
612	1
613	5
614	1
615	3
616	1
617	3
618	1
619	2
620	1
621	1
622	1
627	1
628	2
629	1
631	2
632	1
634	1
635	2
636	2
637	1
638	2
640	1
641	1
642	2
643	1
644	1
645	2
646	3
647	1
648	3
649	2
650	1
651	1
652	1
653	2
654	1
655	2
656	1
657	2
658	1
659	1
660	1
662	3
665	2
666	1
669	2
670	2
672	1
673	2
676	1
677	3
678	1
680	1
682	1
683	2
684	1
685	2
686	2
687	1
688	3
690	1
691	1
692	2
693	2
694	2
695	2
696	1
697	1
699	1
702	1
703	1
705	1
708	2
712	3
714	1
717	1
718	2
720	2
722	1
723	1
726	1
729	1
731	1
732	2
733	3
736	2
737	1
740	1
741	2
742	1
746	1
748	2
749	1
753	1
754	1
755	2
756	1
760	1
765	1
766	2
767	1
770	2
772	1
775	1
776	1
777	1
779	2
782	2
783	1
784	1
785	1
786	1
787	1
788	1
789	1
790	1
791	3
793	1
796	1
797	1
798	1
802	1
805	1
806	2
808	1
809	1
810	1
811	3
813	1
814	1
815	2
816	1
820	1
821	1
823	1
824	1
826	1
827	1
828	1
829	1
831	1
834	1
836	1
839	1
840	1
843	1
845	2
851	1
852	1
853	1
856	1
857	1
858	3
860	1
862	1
866	2
869	1
870	1
871	1
872	1
876	1
877	2
878	1
881	1
882	1
883	2
885	2
886	1
891	2
892	2
893	1
896	1
901	1
903	2
904	1
905	1
919	1
923	1
932	1
937	1
940	1
943	1
946	1
951	1
955	2
961	1
962	1
963	1
964	1
971	1
987	1
989	2
992	2
1005	1
1013	1
1017	1
1019	1
1020	1
1029	1
1037	2
1044	1
1049	1
1055	1
1059	1
1064	1
1067	2
1072	1
1081	1
1088	1
1094	1
1095	1
1099	1
1100	1
1101	2
1114	2
1119	1
1125	1
1137	1
1144	1
1146	1
1153	1
1154	1
1169	1
1172	1
1179	1
1189	1
1192	1
1194	1
1197	1
1220	1
1232	1
1244	1
1248	1
1252	1
1255	1
1256	1
1258	1
1259	1
1274	1
1278	1
1337	1
1340	2
1362	1
1367	1
1389	1
1393	1
1410	1
1434	1
1447	2
1451	1
1455	1
1458	1
1485	1
1487	1
1492	1
1496	1
1505	1
1522	1
1531	1
1538	1
1550	1
1552	1
1555	1
1583	1
1584	1
1585	1
1591	1
1604	1
1607	1
1612	1
1619	1
1646	1
1677	1
1702	1
1709	1
1724	1
1726	1
1735	1
1741	1
1752	1
1758	1
1760	1
1775	1
1786	1
1788	1
1808	1
1816	1
1820	1
1829	1
1866	1
1876	1
1903	1
1911	1
1998	1
2001	1
2018	1
2019	1
2036	1
2048	1
2066	1
2082	1
2087	1
2093	1
2097	1
2099	1
2107	1
2126	1
2133	1
2137	1
2147	1
2151	1
2165	1
2172	1
2184	1
2217	1
2229	1
2237	2
2264	1
2269	1
2288	1
2307	1
2332	1
2354	1
2358	1
2365	1
2374	1
2382	1
2423	1
2426	1
2427	1
2485	1
2497	1
2505	1
2570	1
2608	1
2611	1
2637	1
2659	1
2660	1
2662	1
2718	1
2733	1
2747	1
2783	1
2785	1
2988	1
3043	1
3152	1
3228	1
3248	1
3372	1
3557	1
3582	1
3654	1
3695	1
3705	1
3821	1
3976	1
4189	1
4487	1
6099	1
7817	1
8083	1
25749	1
1319182	1

[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
..._..._...__._...._.._.._....._.._.__._......._......_._._...._._...._.
._._.._.._..__.._._._...__.._...._.._...._...._...._........_.....
[COMPUTING CONFIDENCE INTERVALS]
[WRITING OUTPUT]