AIH curated blacklist: matched 5 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 125
Pass (FILTER=PASS): 22 (17.6%)
Fail (FILTER=FAIL): 103 (82.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 5
All 5 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 25
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 5
total_reads_below_min(4.0<8.0): 3
total_reads_below_min(3.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
total_reads_below_min(6.0<8.0): 2
total_reads_below_min(5.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 2
Breakdown by confidence:
high: 22 pass, 12 fail (total: 34)
low: 0 pass, 38 fail (total: 38)
medium: 0 pass, 53 fail (total: 53)
Arriba filter: 125 rows -> 22 PASS; wrote 659_cB6-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_cB6-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_cB6-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filter_summary.txt