Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9c/ba352399900917e7d15f508d181763/659_6i-T1-TRNA-1_B23MHV2LT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/a01add54c002eee44505dbdfa8dc8f/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/a01add54c002eee44505dbdfa8dc8f/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/eb22a428172bdd8a185ad1e5fe9789/659_6i-T1-TRNA-1_B23MHV2LT4_1
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_6i-T1-TRNA-1_B23MHV2LT4_1/abundance.h5
Successfully converted 659_6i-T1-TRNA-1_B23MHV2LT4_1/abundance.h5 to 659_6i-T1-TRNA-1_B23MHV2LT4_1_kallisto_mqc.tsv
  Sample: 659_6i-T1-TRNA-1_B23MHV2LT4_1
  Mean Fragment Length: 118.3 bp
  Median Fragment Length: 112.0 bp
  pct_mito_est_counts: 0.013%
  pct_ribo_est_counts: 1.454%
  pct_hk_est_counts: 0.443%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.026%
  pct_ribo_tpm: 4.279%
  pct_hk_tpm: 0.671%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 6.257%