Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/636b13c98ee8335f9a0e34f800d23f/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/a2b09cb8fdcfdaed92a6fc8ebd98a9/659_cAd-T1-TRNA-1_B23MHV2LT4_1.features.csv Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/636b13c98ee8335f9a0e34f800d23f/.command.run ==> STAGING COMPLETE (3 inputs) Predicting contamination for 1 sample(s)... Detection threshold: VAF_p90 < 0.9999 Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65 659_cAd-T1-TRNA-1_B23MHV2LT4_1: vaf_p90=0.998997 -> CONTAMINATED (~0.0%) Output saved to: 659_cAd-T1-TRNA-1_B23MHV2LT4_1.predictions.csv Summary: 1/1 samples flagged as contaminated