Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8c/1447ae28d6fb56fe46d6ad918ee185/659_dES-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/eb/3016638fd3263113e16d280279cf5e/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/eb/3016638fd3263113e16d280279cf5e/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory