Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1d/3334a09f4a772e7374cdba4b2d63d4/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a3/0349e376c30f352277a67959cc499c/659_SP-T1-TRNA-1_B23MHV2LT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a3/0349e376c30f352277a67959cc499c/659_SP-T1-TRNA-1_B23MHV2LT4_1_R2.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1d/3334a09f4a772e7374cdba4b2d63d4/.command.run
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory