AIH curated blacklist: matched 9 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 113
Pass (FILTER=PASS): 13 (11.5%)
Fail (FILTER=FAIL): 100 (88.5%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 9
All 9 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 13
confidence_below_min(medium<high): 10
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 8
confidence_below_min(low<high): 8
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
aih_curated_blacklist: 1
Breakdown by confidence:
high: 13 pass, 3 fail (total: 16)
low: 0 pass, 59 fail (total: 59)
medium: 0 pass, 38 fail (total: 38)
Arriba filter: 113 rows -> 13 PASS; wrote 659_bKP-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_bKP-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_bKP-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filter_summary.txt