Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/79/65024b49b4b488650c372f2d156a20/659_bQZ-T1-TRNA-1_B23MHV2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/351fd7dd7404141a9888d815c91a4b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/351fd7dd7404141a9888d815c91a4b/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory