.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (659_bGc-T1-TRNA-1_B23MHV2LT4_1)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/28/a53a37a9a80e4054fe7e7d3c720a71/.command.err
Size: 546 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (659_bGc-T1-TRNA-1_B23MHV2LT4_1)
Attempt

Content

Processing Kallisto file: 659_bGc-T1-TRNA-1_B23MHV2LT4_1/abundance.h5
Successfully converted 659_bGc-T1-TRNA-1_B23MHV2LT4_1/abundance.h5 to 659_bGc-T1-TRNA-1_B23MHV2LT4_1_kallisto_mqc.tsv
  Sample: 659_bGc-T1-TRNA-1_B23MHV2LT4_1
  Mean Fragment Length: 117.9 bp
  Median Fragment Length: 109.0 bp
  pct_mito_est_counts: 0.019%
  pct_ribo_est_counts: 1.008%
  pct_hk_est_counts: 0.392%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.039%
  pct_ribo_tpm: 2.941%
  pct_hk_tpm: 0.575%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.089%