Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/ac145524a3b20cbf1aa17498899f54/659_bIB-T1-TRNA-1_B23MHV2LT4_1.features.csv Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/21fb4131a3a7c0d417fcfc71e54319/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/21fb4131a3a7c0d417fcfc71e54319/.command.run ==> STAGING COMPLETE (3 inputs) Predicting contamination for 1 sample(s)... Detection threshold: VAF_p90 < 0.9999 Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65 659_bIB-T1-TRNA-1_B23MHV2LT4_1: vaf_p90=0.998655 -> CONTAMINATED (~0.1%) Output saved to: 659_bIB-T1-TRNA-1_B23MHV2LT4_1.predictions.csv Summary: 1/1 samples flagged as contaminated