AIH curated blacklist: matched 12 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 239
Pass (FILTER=PASS): 31 (13.0%)
Fail (FILTER=FAIL): 208 (87.0%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 12
All 12 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 78
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 17
confidence_below_min(low<high): 15
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 2
Breakdown by confidence:
high: 31 pass, 2 fail (total: 33)
low: 0 pass, 80 fail (total: 80)
medium: 0 pass, 126 fail (total: 126)
Arriba filter: 239 rows -> 31 PASS; wrote 659_SP-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_SP-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_SP-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filter_summary.txt