AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 213
Pass (FILTER=PASS): 12 (5.6%)
Fail (FILTER=FAIL): 201 (94.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 62
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 21
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 15
confidence_below_min(low<high): 14
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
total_reads_below_min(5.0<8.0): 2
confidence_below_min(medium<high);aih_curated_blacklist: 2
Breakdown by confidence:
high: 12 pass, 5 fail (total: 17)
low: 0 pass, 81 fail (total: 81)
medium: 0 pass, 115 fail (total: 115)
Arriba filter: 213 rows -> 12 PASS; wrote 659_mK-T1-TRNA-2_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_mK-T1-TRNA-2_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_mK-T1-TRNA-2_B23MHV2LT4_1.arriba.fusions.filter_summary.txt