Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/a5f6fb2af18dd9c696cbd975302694/659_bjQ-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/3e4244ed81bb9a488fe181dc0d74d1/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/3e4244ed81bb9a488fe181dc0d74d1/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory