Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4a/cc545c566cc089108cf3dbbf798698/659_ecd-T1-TRNA-1_B23MHV2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/62/4daf98036e838e671db002f064a304/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/62/4daf98036e838e671db002f064a304/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory