.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:EXTRACT_VAF_FEATURES (659_bGW-T1-TRNA-1_B23MHV2LT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7d/b1c284df078d80c97d2705160371bb/.command.log
Size: 567 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:EXTRACT_VAF_FEATURES (659_bGW-T1-TRNA-1_B23MHV2LT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7d/b1c284df078d80c97d2705160371bb/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/c20476ffdedc7003ecdf55a37bfaa6/659_bGW-T1-TRNA-1_B23MHV2LT4_1.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7d/b1c284df078d80c97d2705160371bb/.command.run
==> STAGING COMPLETE (3 inputs)

Processing 1 VCF file(s)...
  659_bGW-T1-TRNA-1_B23MHV2LT4_1: n_snps=13914, vaf_p90=0.999470

Output saved to: 659_bGW-T1-TRNA-1_B23MHV2LT4_1.features.csv
Processed 1 sample(s)