Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/797fb2eb17f69affb0ce20b6ecf7de/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/797fb2eb17f69affb0ce20b6ecf7de/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b5/3c47d1fc4dca33cec6da698bdbf276/659_ri-T1-TRNA-1_B23MHV2LT4_1_R2.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b5/3c47d1fc4dca33cec6da698bdbf276/659_ri-T1-TRNA-1_B23MHV2LT4_1_R1.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory