AIH curated blacklist: matched 12 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 595
Pass (FILTER=PASS): 77 (12.9%)
Fail (FILTER=FAIL): 518 (87.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 12
All 12 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 161
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 88
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 41
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 27
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 23
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 23
confidence_below_min(low<high): 23
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 22
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 16
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 7
Breakdown by confidence:
high: 77 pass, 15 fail (total: 92)
low: 0 pass, 227 fail (total: 227)
medium: 0 pass, 276 fail (total: 276)
Arriba filter: 595 rows -> 77 PASS; wrote 659_ecd-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_ecd-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_ecd-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filter_summary.txt