Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/1a67e0b60d1dee302fceb5b78154d2/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3a/363c4735509e488ba78b818ca00f49/659_egp-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/1a67e0b60d1dee302fceb5b78154d2/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory