Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/83/8b134615432138199f418443793c68/659_dm4-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bc/4ce3b3e9a2e101956f62ac008885a8/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bc/4ce3b3e9a2e101956f62ac008885a8/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory