Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ce/ead7548c923424c68495c616845975/ref_annot.bed
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/fc408990cea65d0ea6f688ae6616c3/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ed/5e6db1165b7fd12c35ab76c4569de3/659_bTo-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/fc408990cea65d0ea6f688ae6616c3/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/69/282e3130ec2b5936f2c532e47d0011/659_bTo-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
==> STAGING COMPLETE (5 inputs)
processing ref_annot.bed ... Done
[W::hts_idx_load3] The index file is older than the data file: 659_bTo-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
processing 659_bTo-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam ... Finished