Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/7e09804cc26915f29a63cea6258286/659_mK-T1-TRNA-2_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/68/c6f6e9c0b76b5b73ead3f7e3466c88/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/68/c6f6e9c0b76b5b73ead3f7e3466c88/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory