Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1f/a55c673be6563efd8d14f47ebf28e0/NTC_0001_0001_B23MHV2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2d/012906246803a5262791e001911a72/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2d/012906246803a5262791e001911a72/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory