Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/24/d52369856efd3cb928dd026541c808/659_bGW-T1-TRNA-1_B23MHV2LT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ef/d98b4237bb5d8b0b37c3a03f9f41ef/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/fc651f2c3769c08a2a356a8475ca35/659_bGW-T1-TRNA-1_B23MHV2LT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ef/d98b4237bb5d8b0b37c3a03f9f41ef/.command.run
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_bGW-T1-TRNA-1_B23MHV2LT4_1/abundance.h5
Successfully converted 659_bGW-T1-TRNA-1_B23MHV2LT4_1/abundance.h5 to 659_bGW-T1-TRNA-1_B23MHV2LT4_1_kallisto_mqc.tsv
  Sample: 659_bGW-T1-TRNA-1_B23MHV2LT4_1
  Mean Fragment Length: 126.8 bp
  Median Fragment Length: 115.0 bp
  pct_mito_est_counts: 0.04%
  pct_ribo_est_counts: 1.411%
  pct_hk_est_counts: 0.674%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.088%
  pct_ribo_tpm: 4.429%
  pct_hk_tpm: 0.977%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.005%