Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4d/052ff77f76eca5c8790dd66b675d4d/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/e4380dfc5a5045b80fe26484405d2b/659_eZ4-T1-TRNA-1_B23MHV2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4d/052ff77f76eca5c8790dd66b675d4d/.command.run ==> STAGING COMPLETE (3 inputs) ls: *.bai: No such file or directory ls: *.csi: No such file or directory