Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a3/6745fa867f427c6cca145df2dfeb66/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b0/0e82fd105c363c8146fbf9c779e01a/659_b4x-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a3/6745fa867f427c6cca145df2dfeb66/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory