Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/34/debca1859b98ef2f436b5abe2bf41b/659_cYf-T1-TRNA-1_B23MHV2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/4f32155526351664d49bbafbb75ee9/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/4f32155526351664d49bbafbb75ee9/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory