Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ad/e4de7f81f3f6e8798c34f8509ef098/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ad/e4de7f81f3f6e8798c34f8509ef098/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/a86723b988dc7de2a421ac8554d635/659_bTq-T1-TRNA-1_B23MHV2LT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/a86723b988dc7de2a421ac8554d635/659_bTq-T1-TRNA-1_B23MHV2LT4_1_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory