-ctat genome lib [/tmp/nxf.bS6BdzvPHf/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.bS6BdzvPHf/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary
-sample contains 294483218 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.bS6BdzvPHf/ctat_genome_lib_build_dir  -J /tmp/nxf.bS6BdzvPHf/659_dXa-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction  -O /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.bS6BdzvPHf/659_dXa-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.bS6BdzvPHf/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[2720000], rate=68571.43/min -building interval tree based on /tmp/nxf.bS6BdzvPHf/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2700000], rate=66557.11/min 
[2710000], rate=66584.77/min -building interval tree based on /tmp/nxf.bS6BdzvPHf/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=100000.00/min 
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[2710000], rate=51619.05/min -building interval tree based on /tmp/nxf.bS6BdzvPHf/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2710000], rate=49892.61/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.bS6BdzvPHf/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
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 10000000.00 reads per min processed...  
 7200000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 4800000.00 reads per min processed...  
 4500000.00 reads per min processed...  
 4000000.00 reads per min processed...  
 3882352.94 reads per min processed...  
 3789473.68 reads per min processed...  
 3900000.00 reads per min processed...  
 3818181.82 reads per min processed...  
 3600000.00 reads per min processed...  
 3692307.69 reads per min processed...  
 3642857.14 reads per min processed...  
 3600000.00 reads per min processed...  
 3454545.45 reads per min processed...  
 3428571.43 reads per min processed...  
 3405405.41 reads per min processed...  
 3473684.21 reads per min processed...  
 3450000.00 reads per min processed...  
 3348837.21 reads per min processed...  
 3333333.33 reads per min processed...  
 3319148.94 reads per min processed...  
 3306122.45 reads per min processed...  
 3230769.23 reads per min processed...  
 3222222.22 reads per min processed...  
 3214285.71 reads per min processed...  
 3206896.55 reads per min processed...  
 3147540.98 reads per min processed...  
 3142857.14 reads per min processed...  
 3138461.54 reads per min processed...  
 3134328.36 reads per min processed...  
 3130434.78 reads per min processed...  
 3126760.56 reads per min processed...  
 3123287.67 reads per min processed...  
 3120000.00 reads per min processed...  
 3116883.12 reads per min processed...  
 3113924.05 reads per min processed...  
 3111111.11 reads per min processed...  
 3108433.73 reads per min processed...  
 3105882.35 reads per min processed...  
 3103448.28 reads per min processed...  
 3101123.60 reads per min processed...  
 3098901.10 reads per min processed...  
 3096774.19 reads per min processed...  
 3094736.84 reads per min processed...  
 3125000.00 reads per min processed...  
 3154639.18 reads per min processed...  
 3216494.85 reads per min processed...  
 3244897.96 reads per min processed...  
 3272727.27 reads per min processed...  
 3300000.00 reads per min processed...  
 3294117.65 reads per min processed...  
 3288461.54 reads per min processed...  
 3283018.87 reads per min processed...  
 3277777.78 reads per min processed...  
 3272727.27 reads per min processed...  
 3267857.14 reads per min processed...  
 3263157.89 reads per min processed...  
 3258620.69 reads per min processed...  
 3254237.29 reads per min processed...  
 3250000.00 reads per min processed...  
 3245901.64 reads per min processed...  
 3241935.48 reads per min processed...  
 3238095.24 reads per min processed...  
 3234375.00 reads per min processed...  
 3230769.23 reads per min processed...  
 3227272.73 reads per min processed...  
 3223880.60 reads per min processed...  
 3220588.24 reads per min processed...  
 3217391.30 reads per min processed...  
 3214285.71 reads per min processed...  
 3211267.61 reads per min processed...  
 3208333.33 reads per min processed...  
 3205479.45 reads per min processed...  
 3202702.70 reads per min processed...  
 3200000.00 reads per min processed...  
 3197368.42 reads per min processed...  
 3194805.19 reads per min processed...  
 3212903.23 reads per min processed...  
 3210191.08 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.bS6BdzvPHf/659_dXa-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.bS6BdzvPHf/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -301964.707880
EM: Round [1] log likelihood: -301814.588002
EM: Round [2] log likelihood: -301757.543599
EM: Round [3] log likelihood: -301730.197861
EM: Round [4] log likelihood: -301715.711505
EM: Round [5] log likelihood: -301707.580260
EM: Round [6] log likelihood: -301702.798835
EM: Round [7] log likelihood: -301699.856380
EM: Round [8] log likelihood: -301697.960874
EM: Round [9] log likelihood: -301696.684820
EM: Round [10] log likelihood: -301695.790454
EM: Round [11] log likelihood: -301695.140976
EM: Round [12] log likelihood: -301694.654743
EM: Round [13] log likelihood: -301694.281190
EM: Round [14] log likelihood: -301693.987851
EM: Round [15] log likelihood: -301693.753174
EM: Round [16] log likelihood: -301693.562412
EM: Round [17] log likelihood: -301693.405198
EM: Round [18] log likelihood: -301693.274069
EM: Round [19] log likelihood: -301693.163537
EM: Round [20] log likelihood: -301693.069492
EM: Round [21] log likelihood: -301692.988806
EM: Round [22] log likelihood: -301692.919063
EM: Round [23] log likelihood: -301692.858370
EM: Round [24] log likelihood: -301692.805228
EM: Round [25] log likelihood: -301692.758436
EM: Round [26] log likelihood: -301692.717022
EM: Round [27] log likelihood: -301692.680194
EM: Round [28] log likelihood: -301692.647298
EM: Round [29] log likelihood: -301692.617792
EM: Round [30] log likelihood: -301692.591224
EM: Round [31] log likelihood: -301692.567212
EM: Round [32] log likelihood: -301692.545435
EM: Round [33] log likelihood: -301692.525618
EM: Round [34] log likelihood: -301692.507527
EM: Round [35] log likelihood: -301692.490962
EM: Round [36] log likelihood: -301692.475749
EM: Round [37] log likelihood: -301692.461737
EM: Round [38] log likelihood: -301692.448798
EM: Round [39] log likelihood: -301692.436816
EM: Round [40] log likelihood: -301692.425694
EM: Round [41] log likelihood: -301692.415343
EM: Round [42] log likelihood: -301692.405688
EM: Round [43] log likelihood: -301692.396661
EM: Round [44] log likelihood: -301692.388203
EM: Round [45] log likelihood: -301692.380260
EM: Round [46] log likelihood: -301692.372787
EM: Round [47] log likelihood: -301692.365741
EM: Round [48] log likelihood: -301692.359087
EM: Round [49] log likelihood: -301692.352790
EM: Round [50] log likelihood: -301692.346821
EM: Round [51] log likelihood: -301692.341154
EM: Round [52] log likelihood: -301692.335765
EM: Round [53] log likelihood: -301692.330633
EM: Round [54] log likelihood: -301692.325739
EM: Round [55] log likelihood: -301692.321065
EM: Round [56] log likelihood: -301692.316596
EM: Round [57] log likelihood: -301692.312317
EM: Round [58] log likelihood: -301692.308216
EM: Round [59] log likelihood: -301692.304282
EM: Round [60] log likelihood: -301692.300503
EM: Round [61] log likelihood: -301692.296869
EM: Round [62] log likelihood: -301692.293373
EM: Round [63] log likelihood: -301692.290006
EM: Round [64] log likelihood: -301692.286761
EM: Round [65] log likelihood: -301692.283631
EM: Round [66] log likelihood: -301692.280610
EM: Round [67] log likelihood: -301692.277691
EM: Round [68] log likelihood: -301692.274871
EM: Round [69] log likelihood: -301692.272143
EM: Round [70] log likelihood: -301692.269504
EM: Round [71] log likelihood: -301692.266949
EM: Round [72] log likelihood: -301692.264475
EM: Round [73] log likelihood: -301692.262077
EM: Round [74] log likelihood: -301692.259753
EM: Round [75] log likelihood: -301692.257498
EM: Round [76] log likelihood: -301692.255312
EM: Round [77] log likelihood: -301692.253190
EM: Round [78] log likelihood: -301692.251130
EM: Round [79] log likelihood: -301692.249129
EM: Round [80] log likelihood: -301692.247186
EM: Round [81] log likelihood: -301692.245298
EM: Round [82] log likelihood: -301692.243464
EM: Round [83] log likelihood: -301692.241680
EM: Round [84] log likelihood: -301692.239946
EM: Round [85] log likelihood: -301692.238260
EM: Round [86] log likelihood: -301692.236620
EM: Round [87] log likelihood: -301692.235024
EM: Round [88] log likelihood: -301692.233472
EM: Round [89] log likelihood: -301692.231961
EM: Round [90] log likelihood: -301692.230490
EM: Round [91] log likelihood: -301692.229059
EM: Round [92] log likelihood: -301692.227665
EM: Round [93] log likelihood: -301692.226308
EM: Round [94] log likelihood: -301692.224987
EM: Round [95] log likelihood: -301692.223700
EM: Round [96] log likelihood: -301692.222446
EM: Round [97] log likelihood: -301692.221225
EM: Round [98] log likelihood: -301692.220035
EM: Round [99] log likelihood: -301692.218877
EM: Round [100] log likelihood: -301692.217747
EM: Round [101] log likelihood: -301692.216647
EM: Round [102] log likelihood: -301692.215574
EM: Round [103] log likelihood: -301692.214529
EM: Round [104] log likelihood: -301692.213511
EM: Round [105] log likelihood: -301692.212518
EM: Round [106] log likelihood: -301692.211550
EM: Round [107] log likelihood: -301692.210607
EM: Round [108] log likelihood: -301692.209687
EM: Round [109] log likelihood: -301692.208790
EM: Round [110] log likelihood: -301692.207916
EM: Round [111] log likelihood: -301692.207064
EM: Round [112] log likelihood: -301692.206232
EM: Round [113] log likelihood: -301692.205422
EM: Round [114] log likelihood: -301692.204632
EM: Round [115] log likelihood: -301692.203861
EM: Round [116] log likelihood: -301692.203109
EM: Round [117] log likelihood: -301692.202376
EM: Round [118] log likelihood: -301692.201662
EM: Round [119] log likelihood: -301692.200964
EM: Round [120] log likelihood: -301692.200284
EM: Round [121] log likelihood: -301692.199621
EM: Round [122] log likelihood: -301692.198974
EM: Round [123] log likelihood: -301692.198343
EM: Round [124] log likelihood: -301692.197728
EM: Round [125] log likelihood: -301692.197127
EM: Round [126] log likelihood: -301692.196541
EM: Round [127] log likelihood: -301692.195970
EM: Round [128] log likelihood: -301692.195413
EM: Round [129] log likelihood: -301692.194869
EM: Round [130] log likelihood: -301692.194338
EM: Round [131] log likelihood: -301692.193821
EM: Round [132] log likelihood: -301692.193316
EM: Round [133] log likelihood: -301692.192823
EM: Round [134] log likelihood: -301692.192343
EM: Round [135] log likelihood: -301692.191874
EM: Round [136] log likelihood: -301692.191416
EM: Round [137] log likelihood: -301692.190970
EM: Round [138] log likelihood: -301692.190534
EM: Round [139] log likelihood: -301692.190109
EM: Round [140] log likelihood: -301692.189694
EM: Round [141] log likelihood: -301692.189290
EM: Round [142] log likelihood: -301692.188895
EM: Round [143] log likelihood: -301692.188510
EM: Round [144] log likelihood: -301692.188134
EM: Round [145] log likelihood: -301692.187767
EM: Round [146] log likelihood: -301692.187409
EM: Round [147] log likelihood: -301692.187060
EM: Round [148] log likelihood: -301692.186719
EM: Round [149] log likelihood: -301692.186386
EM: Round [150] log likelihood: -301692.186062
EM: Round [151] log likelihood: -301692.185745
EM: Round [152] log likelihood: -301692.185436
EM: Round [153] log likelihood: -301692.185134
EM: Round [154] log likelihood: -301692.184840
EM: Round [155] log likelihood: -301692.184553
EM: Round [156] log likelihood: -301692.184272
EM: Round [157] log likelihood: -301692.183999
EM: Round [158] log likelihood: -301692.183731
EM: Round [159] log likelihood: -301692.183471
EM: Round [160] log likelihood: -301692.183217
EM: Round [161] log likelihood: -301692.182968
EM: Round [162] log likelihood: -301692.182726
EM: Round [163] log likelihood: -301692.182490
EM: Round [164] log likelihood: -301692.182259
EM: Round [165] log likelihood: -301692.182034
EM: Round [166] log likelihood: -301692.181814
EM: Round [167] log likelihood: -301692.181599
EM: Round [168] log likelihood: -301692.181390
EM: Round [169] log likelihood: -301692.181186
EM: Round [170] log likelihood: -301692.180986
EM: Round [171] log likelihood: -301692.180792
EM: Round [172] log likelihood: -301692.180602
EM: Round [173] log likelihood: -301692.180416
EM: Round [174] log likelihood: -301692.180235
EM: Round [175] log likelihood: -301692.180059
EM: Round [176] log likelihood: -301692.179886
EM: Round [177] log likelihood: -301692.179718
EM: Round [178] log likelihood: -301692.179554
EM: Round [179] log likelihood: -301692.179393
EM: Round [180] log likelihood: -301692.179237
EM: Round [181] log likelihood: -301692.179084
EM: Round [182] log likelihood: -301692.178935
EM: Round [183] log likelihood: -301692.178790
EM: Round [184] log likelihood: -301692.178648
EM: Round [185] log likelihood: -301692.178509
EM: Round [186] log likelihood: -301692.178374
EM: Round [187] log likelihood: -301692.178242
EM: Round [188] log likelihood: -301692.178113
EM: Round [189] log likelihood: -301692.177987
EM: Round [190] log likelihood: -301692.177864
EM: Round [191] log likelihood: -301692.177744
EM: Round [192] log likelihood: -301692.177627
EM: Round [193] log likelihood: -301692.177513
EM: Round [194] log likelihood: -301692.177401
EM: Round [195] log likelihood: -301692.177292
EM: Round [196] log likelihood: -301692.177186
EM: Round [197] log likelihood: -301692.177082
EM: Round [198] log likelihood: -301692.176981
EM: Round [199] log likelihood: -301692.176882
EM: Stopping iterations at round 199 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -301391.810289
EM: Round [1] log likelihood: -301259.684750
EM: Round [2] log likelihood: -301211.168192
EM: Round [3] log likelihood: -301188.573679
EM: Round [4] log likelihood: -301176.864293
EM: Round [5] log likelihood: -301170.403322
EM: Round [6] log likelihood: -301166.660320
EM: Round [7] log likelihood: -301164.388947
EM: Round [8] log likelihood: -301162.944775
EM: Round [9] log likelihood: -301161.983839
EM: Round [10] log likelihood: -301161.316914
EM: Round [11] log likelihood: -301160.836356
EM: Round [12] log likelihood: -301160.478658
EM: Round [13] log likelihood: -301160.204939
EM: Round [14] log likelihood: -301159.990505
EM: Round [15] log likelihood: -301159.819134
EM: Round [16] log likelihood: -301159.679826
EM: Round [17] log likelihood: -301159.564912
EM: Round [18] log likelihood: -301159.468905
EM: Round [19] log likelihood: -301159.387798
EM: Round [20] log likelihood: -301159.318600
EM: Round [21] log likelihood: -301159.259045
EM: Round [22] log likelihood: -301159.207385
EM: Round [23] log likelihood: -301159.162255
EM: Round [24] log likelihood: -301159.122575
EM: Round [25] log likelihood: -301159.087480
EM: Round [26] log likelihood: -301159.056272
EM: Round [27] log likelihood: -301159.028379
EM: Round [28] log likelihood: -301159.003332
EM: Round [29] log likelihood: -301158.980742
EM: Round [30] log likelihood: -301158.960282
EM: Round [31] log likelihood: -301158.941679
EM: Round [32] log likelihood: -301158.924701
EM: Round [33] log likelihood: -301158.909151
EM: Round [34] log likelihood: -301158.894861
EM: Round [35] log likelihood: -301158.881686
EM: Round [36] log likelihood: -301158.869502
EM: Round [37] log likelihood: -301158.858200
EM: Round [38] log likelihood: -301158.847689
EM: Round [39] log likelihood: -301158.837885
EM: Round [40] log likelihood: -301158.828717
EM: Round [41] log likelihood: -301158.820124
EM: Round [42] log likelihood: -301158.812049
EM: Round [43] log likelihood: -301158.804446
EM: Round [44] log likelihood: -301158.797270
EM: Round [45] log likelihood: -301158.790485
EM: Round [46] log likelihood: -301158.784056
EM: Round [47] log likelihood: -301158.777954
EM: Round [48] log likelihood: -301158.772152
EM: Round [49] log likelihood: -301158.766627
EM: Round [50] log likelihood: -301158.761356
EM: Round [51] log likelihood: -301158.756321
EM: Round [52] log likelihood: -301158.751505
EM: Round [53] log likelihood: -301158.746892
EM: Round [54] log likelihood: -301158.742469
EM: Round [55] log likelihood: -301158.738222
EM: Round [56] log likelihood: -301158.734141
EM: Round [57] log likelihood: -301158.730215
EM: Round [58] log likelihood: -301158.726434
EM: Round [59] log likelihood: -301158.722791
EM: Round [60] log likelihood: -301158.719276
EM: Round [61] log likelihood: -301158.715884
EM: Round [62] log likelihood: -301158.712607
EM: Round [63] log likelihood: -301158.709439
EM: Round [64] log likelihood: -301158.706376
EM: Round [65] log likelihood: -301158.703411
EM: Round [66] log likelihood: -301158.700540
EM: Round [67] log likelihood: -301158.697759
EM: Round [68] log likelihood: -301158.695064
EM: Round [69] log likelihood: -301158.692451
EM: Round [70] log likelihood: -301158.689916
EM: Round [71] log likelihood: -301158.687456
EM: Round [72] log likelihood: -301158.685068
EM: Round [73] log likelihood: -301158.682749
EM: Round [74] log likelihood: -301158.680497
EM: Round [75] log likelihood: -301158.678309
EM: Round [76] log likelihood: -301158.676183
EM: Round [77] log likelihood: -301158.674116
EM: Round [78] log likelihood: -301158.672106
EM: Round [79] log likelihood: -301158.670152
EM: Round [80] log likelihood: -301158.668251
EM: Round [81] log likelihood: -301158.666401
EM: Round [82] log likelihood: -301158.664601
EM: Round [83] log likelihood: -301158.662850
EM: Round [84] log likelihood: -301158.661145
EM: Round [85] log likelihood: -301158.659486
EM: Round [86] log likelihood: -301158.657870
EM: Round [87] log likelihood: -301158.656297
EM: Round [88] log likelihood: -301158.654765
EM: Round [89] log likelihood: -301158.653273
EM: Round [90] log likelihood: -301158.651819
EM: Round [91] log likelihood: -301158.650404
EM: Round [92] log likelihood: -301158.649024
EM: Round [93] log likelihood: -301158.647681
EM: Round [94] log likelihood: -301158.646371
EM: Round [95] log likelihood: -301158.645095
EM: Round [96] log likelihood: -301158.643852
EM: Round [97] log likelihood: -301158.642640
EM: Round [98] log likelihood: -301158.641459
EM: Round [99] log likelihood: -301158.640308
EM: Round [100] log likelihood: -301158.639185
EM: Round [101] log likelihood: -301158.638091
EM: Round [102] log likelihood: -301158.637025
EM: Round [103] log likelihood: -301158.635985
EM: Round [104] log likelihood: -301158.634972
EM: Round [105] log likelihood: -301158.633983
EM: Round [106] log likelihood: -301158.633020
EM: Round [107] log likelihood: -301158.632080
EM: Round [108] log likelihood: -301158.631164
EM: Round [109] log likelihood: -301158.630270
EM: Round [110] log likelihood: -301158.629399
EM: Round [111] log likelihood: -301158.628549
EM: Round [112] log likelihood: -301158.627721
EM: Round [113] log likelihood: -301158.626913
EM: Round [114] log likelihood: -301158.626124
EM: Round [115] log likelihood: -301158.625356
EM: Round [116] log likelihood: -301158.624606
EM: Round [117] log likelihood: -301158.623874
EM: Round [118] log likelihood: -301158.623161
EM: Round [119] log likelihood: -301158.622465
EM: Round [120] log likelihood: -301158.621786
EM: Round [121] log likelihood: -301158.621124
EM: Round [122] log likelihood: -301158.620478
EM: Round [123] log likelihood: -301158.619848
EM: Round [124] log likelihood: -301158.619234
EM: Round [125] log likelihood: -301158.618634
EM: Round [126] log likelihood: -301158.618049
EM: Round [127] log likelihood: -301158.617478
EM: Round [128] log likelihood: -301158.616921
EM: Round [129] log likelihood: -301158.616378
EM: Round [130] log likelihood: -301158.615848
EM: Round [131] log likelihood: -301158.615331
EM: Round [132] log likelihood: -301158.614827
EM: Round [133] log likelihood: -301158.614334
EM: Round [134] log likelihood: -301158.613854
EM: Round [135] log likelihood: -301158.613385
EM: Round [136] log likelihood: -301158.612928
EM: Round [137] log likelihood: -301158.612482
EM: Round [138] log likelihood: -301158.612047
EM: Round [139] log likelihood: -301158.611622
EM: Round [140] log likelihood: -301158.611208
EM: Round [141] log likelihood: -301158.610803
EM: Round [142] log likelihood: -301158.610409
EM: Round [143] log likelihood: -301158.610023
EM: Round [144] log likelihood: -301158.609648
EM: Round [145] log likelihood: -301158.609281
EM: Round [146] log likelihood: -301158.608923
EM: Round [147] log likelihood: -301158.608574
EM: Round [148] log likelihood: -301158.608233
EM: Round [149] log likelihood: -301158.607901
EM: Round [150] log likelihood: -301158.607576
EM: Round [151] log likelihood: -301158.607259
EM: Round [152] log likelihood: -301158.606950
EM: Round [153] log likelihood: -301158.606649
EM: Round [154] log likelihood: -301158.606355
EM: Round [155] log likelihood: -301158.606067
EM: Round [156] log likelihood: -301158.605787
EM: Round [157] log likelihood: -301158.605513
EM: Round [158] log likelihood: -301158.605246
EM: Round [159] log likelihood: -301158.604986
EM: Round [160] log likelihood: -301158.604732
EM: Round [161] log likelihood: -301158.604483
EM: Round [162] log likelihood: -301158.604241
EM: Round [163] log likelihood: -301158.604005
EM: Round [164] log likelihood: -301158.603774
EM: Round [165] log likelihood: -301158.603549
EM: Round [166] log likelihood: -301158.603329
EM: Round [167] log likelihood: -301158.603115
EM: Round [168] log likelihood: -301158.602905
EM: Round [169] log likelihood: -301158.602701
EM: Round [170] log likelihood: -301158.602502
EM: Round [171] log likelihood: -301158.602307
EM: Round [172] log likelihood: -301158.602117
EM: Round [173] log likelihood: -301158.601932
EM: Round [174] log likelihood: -301158.601751
EM: Round [175] log likelihood: -301158.601574
EM: Round [176] log likelihood: -301158.601402
EM: Round [177] log likelihood: -301158.601233
EM: Round [178] log likelihood: -301158.601069
EM: Round [179] log likelihood: -301158.600909
EM: Round [180] log likelihood: -301158.600752
EM: Round [181] log likelihood: -301158.600600
EM: Round [182] log likelihood: -301158.600450
EM: Round [183] log likelihood: -301158.600305
EM: Round [184] log likelihood: -301158.600163
EM: Round [185] log likelihood: -301158.600024
EM: Round [186] log likelihood: -301158.599889
EM: Round [187] log likelihood: -301158.599757
EM: Round [188] log likelihood: -301158.599628
EM: Round [189] log likelihood: -301158.599502
EM: Round [190] log likelihood: -301158.599379
EM: Round [191] log likelihood: -301158.599259
EM: Round [192] log likelihood: -301158.599142
EM: Round [193] log likelihood: -301158.599028
EM: Round [194] log likelihood: -301158.598917
EM: Round [195] log likelihood: -301158.598808
EM: Round [196] log likelihood: -301158.598702
EM: Round [197] log likelihood: -301158.598598
EM: Round [198] log likelihood: -301158.598497
EM: Round [199] log likelihood: -301158.598398
EM: Stopping iterations at round 199 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.bS6BdzvPHf/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.bS6BdzvPHf/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.bS6BdzvPHf/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 294483218 > /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.bS6BdzvPHf/ctat_genome_lib_build_dir > /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.bS6BdzvPHf/ctat_genome_lib_build_dir --annotate /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.bS6BdzvPHf/ctat_genome_lib_build_dir
-done, see /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.bS6BdzvPHf/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1700, filtered: 11245)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.bS6BdzvPHf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.bS6BdzvPHf/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000285761.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000258948.2]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000267325.2]
WARNING, no entry stored in dbm for [ENSG00000254701.3]
WARNING, no entry stored in dbm for [ENSG00000237876.1]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000203709.12]
WARNING, no entry stored in dbm for [ENSG00000229127.2]
WARNING, no entry stored in dbm for [ENSG00000283162.1]
WARNING, no entry stored in dbm for [ENSG00000279712.1]
WARNING, no entry stored in dbm for [ENSG00000226002.1]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
WARNING, no entry stored in dbm for [ENSG00000279927.1]
WARNING, no entry stored in dbm for [ENSG00000230035.2]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000277486.1]
WARNING, no entry stored in dbm for [ENSG00000240990.10]
WARNING, no entry stored in dbm for [ENSG00000213300.5]
WARNING, no entry stored in dbm for [ENSG00000196301.3]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000279682.1]
WARNING, no entry stored in dbm for [ENSG00000183935.5]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000234945.8]
WARNING, no entry stored in dbm for [ENSG00000213442.5]
WARNING, no entry stored in dbm for [ENSG00000188388.10]
WARNING, no entry stored in dbm for [ENSG00000238105.7]
WARNING, no entry stored in dbm for [ENSG00000269929.3]
WARNING, no entry stored in dbm for [ENSG00000242908.6]
WARNING, no entry stored in dbm for [ENSG00000255474.1]
WARNING, no entry stored in dbm for [ENSG00000280202.1]
WARNING, no entry stored in dbm for [ENSG00000255471.1]
WARNING, no entry stored in dbm for [ENSG00000250815.1]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000228327.3]
WARNING, no entry stored in dbm for [ENSG00000231527.7]
WARNING, no entry stored in dbm for [ENSG00000231527.7]
WARNING, no entry stored in dbm for [ENSG00000251136.9]
WARNING, no entry stored in dbm for [ENSG00000272142.4]
WARNING, no entry stored in dbm for [ENSG00000258642.1]
WARNING, no entry stored in dbm for [ENSG00000267474.1]
WARNING, no entry stored in dbm for [ENSG00000236172.7]
WARNING, no entry stored in dbm for [ENSG00000284240.1]
WARNING, no entry stored in dbm for [ENSG00000270576.1]
WARNING, no entry stored in dbm for [ENSG00000186312.10]
WARNING, no entry stored in dbm for [ENSG00000285675.1]
WARNING, no entry stored in dbm for [ENSG00000262312.2]
WARNING, no entry stored in dbm for [ENSG00000239718.1]
WARNING, no entry stored in dbm for [ENSG00000236081.1]
WARNING, no entry stored in dbm for [ENSG00000286482.1]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000234817.2]
WARNING, no entry stored in dbm for [ENSG00000250191.1]
WARNING, no entry stored in dbm for [ENSG00000250959.2]
WARNING, no entry stored in dbm for [ENSG00000234663.7]
WARNING, no entry stored in dbm for [ENSG00000272253.1]
WARNING, no entry stored in dbm for [ENSG00000212559.1]
WARNING, no entry stored in dbm for [ENSG00000250768.1]
WARNING, no entry stored in dbm for [ENSG00000183250.12]
WARNING, no entry stored in dbm for [ENSG00000231150.5]
WARNING, no entry stored in dbm for [ENSG00000260261.2]
WARNING, no entry stored in dbm for [ENSG00000272337.1]
WARNING, no entry stored in dbm for [ENSG00000207295.1]
WARNING, no entry stored in dbm for [ENSG00000200350.1]
WARNING, no entry stored in dbm for [ENSG00000200571.1]
WARNING, no entry stored in dbm for [ENSG00000201444.1]
WARNING, no entry stored in dbm for [ENSG00000252130.1]
WARNING, no entry stored in dbm for [ENSG00000251381.8]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000228158.2]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000189223.15]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000189223.15]
WARNING, no entry stored in dbm for [ENSG00000238232.1]
WARNING, no entry stored in dbm for [ENSG00000230330.1]
WARNING, no entry stored in dbm for [ENSG00000265790.1]
WARNING, no entry stored in dbm for [ENSG00000250405.2]
WARNING, no entry stored in dbm for [ENSG00000224216.1]
WARNING, no entry stored in dbm for [ENSG00000269904.2]
WARNING, no entry stored in dbm for [ENSG00000280061.1]
WARNING, no entry stored in dbm for [ENSG00000203645.2]
WARNING, no entry stored in dbm for [ENSG00000218418.2]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000235944.8]
WARNING, no entry stored in dbm for [ENSG00000247363.2]
WARNING, no entry stored in dbm for [ENSG00000245156.1]
WARNING, no entry stored in dbm for [ENSG00000279434.1]
WARNING, no entry stored in dbm for [ENSG00000225670.4]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000226445.2]
WARNING, no entry stored in dbm for [ENSG00000263647.1]
WARNING, no entry stored in dbm for [ENSG00000251051.1]
WARNING, no entry stored in dbm for [ENSG00000251079.6]
WARNING, no entry stored in dbm for [ENSG00000240254.2]
WARNING, no entry stored in dbm for [ENSG00000180139.11]
WARNING, no entry stored in dbm for [ENSG00000283213.1]
WARNING, no entry stored in dbm for [ENSG00000258203.5]
WARNING, no entry stored in dbm for [ENSG00000227485.1]
WARNING, no entry stored in dbm for [ENSG00000227948.4]
WARNING, no entry stored in dbm for [ENSG00000236017.8]
WARNING, no entry stored in dbm for [ENSG00000243547.1]
WARNING, no entry stored in dbm for [ENSG00000266441.1]
WARNING, no entry stored in dbm for [ENSG00000283704.1]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000286756.1]
WARNING, no entry stored in dbm for [ENSG00000233990.1]
WARNING, no entry stored in dbm for [ENSG00000259984.1]
WARNING, no entry stored in dbm for [ENSG00000234712.1]
WARNING, no entry stored in dbm for [ENSG00000230021.10]
WARNING, no entry stored in dbm for [ENSG00000226401.3]
WARNING, no entry stored in dbm for [ENSG00000170161.7]
WARNING, no entry stored in dbm for [ENSG00000279321.1]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000284882.1]
WARNING, no entry stored in dbm for [ENSG00000288583.1]
WARNING, no entry stored in dbm for [ENSG00000287368.1]
WARNING, no entry stored in dbm for [ENSG00000271250.1]
WARNING, no entry stored in dbm for [ENSG00000240509.1]
WARNING, no entry stored in dbm for [ENSG00000234694.1]
WARNING, no entry stored in dbm for [ENSG00000273162.1]
WARNING, no entry stored in dbm for [ENSG00000258414.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000233710.1]
WARNING, no entry stored in dbm for [ENSG00000271913.7]
WARNING, no entry stored in dbm for [ENSG00000284719.1]
WARNING, no entry stored in dbm for [ENSG00000230107.1]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000232599.1]
WARNING, no entry stored in dbm for [ENSG00000268758.7]
WARNING, no entry stored in dbm for [ENSG00000231187.3]
WARNING, no entry stored in dbm for [ENSG00000285844.2]
WARNING, no entry stored in dbm for [ENSG00000287979.1]
WARNING, no entry stored in dbm for [ENSG00000224481.3]
WARNING, no entry stored in dbm for [ENSG00000276216.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000228327.3]
WARNING, no entry stored in dbm for [ENSG00000275315.1]
WARNING, no entry stored in dbm for [ENSG00000254701.3]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000232748.3]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000260756.1]
WARNING, no entry stored in dbm for [ENSG00000285822.1]
WARNING, no entry stored in dbm for [ENSG00000260261.2]
WARNING, no entry stored in dbm for [ENSG00000214900.11]
WARNING, no entry stored in dbm for [ENSG00000244398.1]
WARNING, no entry stored in dbm for [ENSG00000226767.1]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000261158.1]
WARNING, no entry stored in dbm for [ENSG00000250111.3]
WARNING, no entry stored in dbm for [ENSG00000250111.3]
WARNING, no entry stored in dbm for [ENSG00000248347.3]
WARNING, no entry stored in dbm for [ENSG00000170089.15]
WARNING, no entry stored in dbm for [ENSG00000286436.1]
WARNING, no entry stored in dbm for [ENSG00000279410.1]
WARNING, no entry stored in dbm for [ENSG00000286338.1]
WARNING, no entry stored in dbm for [ENSG00000284128.1]
WARNING, no entry stored in dbm for [ENSG00000286292.1]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000284687.1]
WARNING, no entry stored in dbm for [ENSG00000249188.1]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000284783.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000226411.1]
WARNING, no entry stored in dbm for [ENSG00000228400.2]
WARNING, no entry stored in dbm for [ENSG00000257989.1]
WARNING, no entry stored in dbm for [ENSG00000283236.1]
WARNING, no entry stored in dbm for [ENSG00000235837.1]
WARNING, no entry stored in dbm for [ENSG00000239985.2]
WARNING, no entry stored in dbm for [ENSG00000287494.1]
WARNING, no entry stored in dbm for [ENSG00000287710.1]
WARNING, no entry stored in dbm for [ENSG00000225649.6]
WARNING, no entry stored in dbm for [ENSG00000262262.1]
WARNING, no entry stored in dbm for [ENSG00000260784.1]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000251131.2]
WARNING, no entry stored in dbm for [ENSG00000259172.1]
WARNING, no entry stored in dbm for [ENSG00000253636.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000279569.1]
WARNING, no entry stored in dbm for [ENSG00000271333.1]
WARNING, no entry stored in dbm for [ENSG00000246089.3]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000251199.6]
WARNING, no entry stored in dbm for [ENSG00000261526.2]
WARNING, no entry stored in dbm for [ENSG00000270248.1]
WARNING, no entry stored in dbm for [ENSG00000254363.6]
WARNING, no entry stored in dbm for [ENSG00000247199.5]
WARNING, no entry stored in dbm for [ENSG00000242540.3]
WARNING, no entry stored in dbm for [ENSG00000282339.1]
WARNING, no entry stored in dbm for [ENSG00000288585.1]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000257612.2]
WARNING, no entry stored in dbm for [ENSG00000286797.1]
WARNING, no entry stored in dbm for [ENSG00000223725.6]
WARNING, no entry stored in dbm for [ENSG00000249637.2]
WARNING, no entry stored in dbm for [ENSG00000280007.1]
WARNING, no entry stored in dbm for [ENSG00000262202.4]
WARNING, no entry stored in dbm for [ENSG00000287640.1]
WARNING, no entry stored in dbm for [ENSG00000176043.5]
WARNING, no entry stored in dbm for [ENSG00000279865.1]
WARNING, no entry stored in dbm for [ENSG00000196205.8]
WARNING, no entry stored in dbm for [ENSG00000177418.2]
WARNING, no entry stored in dbm for [ENSG00000227081.5]
WARNING, no entry stored in dbm for [ENSG00000279762.3]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000254180.2]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000228113.7]
WARNING, no entry stored in dbm for [ENSG00000230937.12]
WARNING, no entry stored in dbm for [ENSG00000282458.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.bS6BdzvPHf/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)