.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:EXTRACT_VAF_FEATURES (659_mK-T1-TRNA-2_B23MHV2LT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/65/a06196b348eafcfbbb90ff9322307e/.command.log
Size: 564 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:EXTRACT_VAF_FEATURES (659_mK-T1-TRNA-2_B23MHV2LT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/9149058db2365d7be04dcd145a3fdc/659_mK-T1-TRNA-2_B23MHV2LT4_1.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/65/a06196b348eafcfbbb90ff9322307e/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/65/a06196b348eafcfbbb90ff9322307e/.command.run
==> STAGING COMPLETE (3 inputs)

Processing 1 VCF file(s)...
  659_mK-T1-TRNA-2_B23MHV2LT4_1: n_snps=13983, vaf_p90=0.999663

Output saved to: 659_mK-T1-TRNA-2_B23MHV2LT4_1.features.csv
Processed 1 sample(s)