Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/88ab499682d1deb1a7395b59481c34/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/07eb9a5dd3821e049471cfb99ec8bd/659_cq5-T1-TRNA-1_B23MHV2LT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/07eb9a5dd3821e049471cfb99ec8bd/659_cq5-T1-TRNA-1_B23MHV2LT4_1_R2.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/88ab499682d1deb1a7395b59481c34/.command.run
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory