Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/3dc06afdf2dac418ef23ce0518fa86/659_eKx-T1-TRNA-1_B23MHV2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/339917c9629b719ef16beb56df4e57/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/339917c9629b719ef16beb56df4e57/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory