Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/5ca3da6ca1a7d04e8f464be2554eb9/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/5ca3da6ca1a7d04e8f464be2554eb9/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/dd9efcd2a24ffc2099e3fcd33b1e25/659_dfA-T1-TRNA-1_B23MHV2LT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/dd9efcd2a24ffc2099e3fcd33b1e25/659_dfA-T1-TRNA-1_B23MHV2LT4_1_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory