Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ce/5cb1427259774b8aadfdc872282249/659_c95-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/220cbfb2e702ea56d7300b64d43298/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/220cbfb2e702ea56d7300b64d43298/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory