File Info
- Filename
- Quality_Metrics.csv
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- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L003/Reports/Quality_Metrics.csv
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- 9.8 KB
- Workflow Run
- dev_rna_exp09_10-73d51683
- Published
- Jun 07, 2026 11:28 PM
Content
View in new tab| Lane | SampleID | index | index2 | ReadNumber | Yield | YieldQ30 | QualityScoreSum | Mean Quality Score (PF) | % Q30 |
| 3 | 659_b6o-T1-TRNA-1_B23MHV2LT4_1 | TAGCGAGGCT | TTGCTCACGG | 1 | 16708150 | 11251025 | 548486279 | 32.83 | 0.67 |
| 3 | 659_b6o-T1-TRNA-1_B23MHV2LT4_1 | TAGCGAGGCT | TTGCTCACGG | 2 | 16708150 | 10579046 | 541874483 | 32.43 | 0.63 |
| 3 | 659_cAa-T1-TRNA-1_B23MHV2LT4_1 | CCAACTGTAT | GCGCTAGAGA | 1 | 12673128 | 10447035 | 460720827 | 36.35 | 0.82 |
| 3 | 659_cAa-T1-TRNA-1_B23MHV2LT4_1 | CCAACTGTAT | GCGCTAGAGA | 2 | 12673128 | 9330779 | 441607346 | 34.85 | 0.74 |
| 3 | 659_Kh-T1-TRNA-1_B23MHV2LT4_1 | GAGTAGTGAC | GCGATGCCAA | 1 | 128332182 | 120112059 | 4963122153 | 38.67 | 0.94 |
| 3 | 659_Kh-T1-TRNA-1_B23MHV2LT4_1 | GAGTAGTGAC | GCGATGCCAA | 2 | 128332182 | 117563575 | 4911832033 | 38.27 | 0.92 |
| 3 | 659_c95-T1-TRNA-1_B23MHV2LT4_1 | CCAGTATTCT | ACGAAGCGAT | 1 | 16914162320 | 16011699745 | 657595810624 | 38.88 | 0.95 |
| 3 | 659_c95-T1-TRNA-1_B23MHV2LT4_1 | CCAGTATTCT | ACGAAGCGAT | 2 | 16914162320 | 15919111818 | 655799957307 | 38.77 | 0.94 |
| 3 | 659_ciJ-T1-TRNA-1_B23MHV2LT4_1 | ATCATACCGC | ATGTCGTACT | 1 | 14665324454 | 13858876122 | 569446365150 | 38.83 | 0.95 |
| 3 | 659_ciJ-T1-TRNA-1_B23MHV2LT4_1 | ATCATACCGC | ATGTCGTACT | 2 | 14665324454 | 13728066070 | 566891711362 | 38.66 | 0.94 |
| 3 | 659_bhK-T1-TRNA-1_B23MHV2LT4_1 | ATTCGCACTA | TCTGTATGGT | 1 | 18971974918 | 17881573214 | 735511814117 | 38.77 | 0.94 |
| 3 | 659_bhK-T1-TRNA-1_B23MHV2LT4_1 | ATTCGCACTA | TCTGTATGGT | 2 | 18971974918 | 17795814726 | 734281740558 | 38.70 | 0.94 |
| 3 | 659_Lx-T1-TRNA-1_B23MHV2LT4_1 | CTCTTCAGCA | TTGTCTCTAC | 1 | 10239066286 | 9368913642 | 390303915840 | 38.12 | 0.92 |
| 3 | 659_Lx-T1-TRNA-1_B23MHV2LT4_1 | CTCTTCAGCA | TTGTCTCTAC | 2 | 10239066286 | 9561117128 | 395410785851 | 38.62 | 0.93 |
| 3 | 659_bUW-T1-TRNA-1_B23MHV2LT4_1 | CTGTATGCCA | TTCCGGCTGT | 1 | 29033992194 | 27375632653 | 1125907747108 | 38.78 | 0.94 |
| 3 | 659_bUW-T1-TRNA-1_B23MHV2LT4_1 | CTGTATGCCA | TTCCGGCTGT | 2 | 29033992194 | 27285850750 | 1124883272572 | 38.74 | 0.94 |
| 3 | 659_mK-T1-TRNA-2_B23MHV2LT4_1 | TCTGACTATG | TAACCAGATC | 1 | 10676530349 | 9768024486 | 406931841657 | 38.11 | 0.91 |
| 3 | 659_mK-T1-TRNA-2_B23MHV2LT4_1 | TCTGACTATG | TAACCAGATC | 2 | 10676530349 | 9934190124 | 411534916830 | 38.55 | 0.93 |
| 3 | 659_dwi-T1-TRNA-1_B23MHV2LT4_1 | TGTGACGTAT | GCAGCGTTAG | 1 | 20771862 | 16863687 | 749438043 | 36.08 | 0.81 |
| 3 | 659_dwi-T1-TRNA-1_B23MHV2LT4_1 | TGTGACGTAT | GCAGCGTTAG | 2 | 20771862 | 15335456 | 724021688 | 34.86 | 0.74 |
| 3 | NTC_0001_0001_B23MHV2LT4_1 | AGAAGATTGG | AGAAGGTACT | 1 | 6853890 | 4277943 | 217792515 | 31.78 | 0.62 |
| 3 | NTC_0001_0001_B23MHV2LT4_1 | AGAAGATTGG | AGAAGGTACT | 2 | 6853890 | 4982855 | 237523559 | 34.66 | 0.73 |
| 3 | 659_d01-T1-TRNA-1_B23MHV2LT4_1 | ATCCAGCATG | AGAGCTCTAC | 1 | 12788592717 | 11894057002 | 491990807512 | 38.47 | 0.93 |
| 3 | 659_d01-T1-TRNA-1_B23MHV2LT4_1 | ATCCAGCATG | AGAGCTCTAC | 2 | 12788592717 | 11923985648 | 493407848732 | 38.58 | 0.93 |
| 3 | 659_bNS-T1-TRNA-1_B23MHV2LT4_1 | GCGCCATATA | GAACCTCCTA | 1 | 15059597987 | 14174243199 | 583327073607 | 38.73 | 0.94 |
| 3 | 659_bNS-T1-TRNA-1_B23MHV2LT4_1 | GCGCCATATA | GAACCTCCTA | 2 | 15059597987 | 14165749557 | 583714114746 | 38.76 | 0.94 |
| 3 | 659_bR4-T1-TRNA-1_B23MHV2LT4_1 | CACTCGCATA | GAACGCGACA | 1 | 11140588683 | 10467632006 | 431123683895 | 38.70 | 0.94 |
| 3 | 659_bR4-T1-TRNA-1_B23MHV2LT4_1 | CACTCGCATA | GAACGCGACA | 2 | 11140588683 | 10443254824 | 431018197012 | 38.69 | 0.94 |
| 3 | 659_buD-T1-TRNA-1_B23MHV2LT4_1 | AAGGTCAATG | GCATTATAGG | 1 | 15225277603 | 14250467287 | 587915452672 | 38.61 | 0.94 |
| 3 | 659_buD-T1-TRNA-1_B23MHV2LT4_1 | AAGGTCAATG | GCATTATAGG | 2 | 15225277603 | 14289270379 | 589472772613 | 38.72 | 0.94 |
| 3 | 659_cYf-T1-TRNA-1_B23MHV2LT4_1 | GTGACGCACA | CGTTGTTGCG | 1 | 16413770215 | 15259108370 | 631403597930 | 38.47 | 0.93 |
| 3 | 659_cYf-T1-TRNA-1_B23MHV2LT4_1 | GTGACGCACA | CGTTGTTGCG | 2 | 16413770215 | 15220778353 | 631299663301 | 38.46 | 0.93 |
| 3 | 659_R1-T1-TRNA-1_B23MHV2LT4_1 | TGTCAGGCTT | GATTCCTTAC | 1 | 19046536 | 13047158 | 630186077 | 33.09 | 0.69 |
| 3 | 659_R1-T1-TRNA-1_B23MHV2LT4_1 | TGTCAGGCTT | GATTCCTTAC | 2 | 19046536 | 11807296 | 612310111 | 32.15 | 0.62 |
| 3 | 659_eGK-T1-TRNA-1_B23MHV2LT4_1 | CACGTGATGG | TACAACGTGT | 1 | 15767455183 | 14919667037 | 612817254956 | 38.87 | 0.95 |
| 3 | 659_eGK-T1-TRNA-1_B23MHV2LT4_1 | CACGTGATGG | TACAACGTGT | 2 | 15767455183 | 14878610470 | 612220815352 | 38.83 | 0.94 |
| 3 | 659_On-T1-TRNA-2_B23MHV2LT4_1 | CCATCACGTG | TCTCCTGGTT | 1 | 12668343716 | 11939191753 | 491083826035 | 38.76 | 0.94 |
| 3 | 659_On-T1-TRNA-2_B23MHV2LT4_1 | CCATCACGTG | TCTCCTGGTT | 2 | 12668343716 | 11926177320 | 491234026803 | 38.78 | 0.94 |
| 3 | 659_d0V-T1-TRNA-1_B23MHV2LT4_1 | ACCAGGAATT | AGCATGGCAT | 1 | 13906798 | 9323626 | 455270221 | 32.74 | 0.67 |
| 3 | 659_d0V-T1-TRNA-1_B23MHV2LT4_1 | ACCAGGAATT | AGCATGGCAT | 2 | 13906798 | 9963479 | 479598158 | 34.49 | 0.72 |
| 3 | 659_8h-T1-TRNA-1_B23MHV2LT4_1 | TAAGGCTCAC | GACGTTACTT | 1 | 10916092 | 7801763 | 369157694 | 33.82 | 0.71 |
| 3 | 659_8h-T1-TRNA-1_B23MHV2LT4_1 | TAAGGCTCAC | GACGTTACTT | 2 | 10916092 | 7118957 | 360097370 | 32.99 | 0.65 |
| 3 | 659_Dl-T1-TRNA-1_B23MHV2LT4_1 | TGGCACTGAT | GCCATAGAAT | 1 | 7779412488 | 7247537580 | 299777108220 | 38.53 | 0.93 |
| 3 | 659_Dl-T1-TRNA-1_B23MHV2LT4_1 | TGGCACTGAT | GCCATAGAAT | 2 | 7779412488 | 7267880481 | 300403126791 | 38.62 | 0.93 |
| 3 | 659_eKx-T1-TRNA-1_B23MHV2LT4_1 | CATATGGTGC | ACAGATCTCA | 1 | 15076897 | 11522241 | 527623251 | 35.00 | 0.76 |
| 3 | 659_eKx-T1-TRNA-1_B23MHV2LT4_1 | CATATGGTGC | ACAGATCTCA | 2 | 15076897 | 10331509 | 510230443 | 33.84 | 0.69 |
| 3 | 659_dES-T1-TRNA-1_B23MHV2LT4_1 | GCACTACCAG | GAAGACTTAG | 1 | 11757610923 | 10933341945 | 452404242438 | 38.48 | 0.93 |
| 3 | 659_dES-T1-TRNA-1_B23MHV2LT4_1 | GCACTACCAG | GAAGACTTAG | 2 | 11757610923 | 11018349855 | 454844860485 | 38.69 | 0.94 |
| 3 | 659_ri-T1-TRNA-1_B23MHV2LT4_1 | GCATAAGATC | GAGAACTGGA | 1 | 6325893434 | 5723300151 | 239784000009 | 37.91 | 0.90 |
| 3 | 659_ri-T1-TRNA-1_B23MHV2LT4_1 | GCATAAGATC | GAGAACTGGA | 2 | 6325893434 | 5870801654 | 243532987019 | 38.50 | 0.93 |
| 3 | 659_1q-T1-TRNA-1_B23MHV2LT4_1 | AAGGTGTACT | AGCGCTACAG | 1 | 19649276358 | 18367946983 | 758378811379 | 38.60 | 0.93 |
| 3 | 659_1q-T1-TRNA-1_B23MHV2LT4_1 | AAGGTGTACT | AGCGCTACAG | 2 | 19649276358 | 18336193605 | 758418176154 | 38.60 | 0.93 |
| 3 | 659_ecd-T1-TRNA-1_B23MHV2LT4_1 | CTTCTAACCG | TGATCAGTCT | 1 | 17822688701 | 16673103764 | 688234319693 | 38.62 | 0.94 |
| 3 | 659_ecd-T1-TRNA-1_B23MHV2LT4_1 | CTTCTAACCG | TGATCAGTCT | 2 | 17822688701 | 16698424604 | 689468594168 | 38.68 | 0.94 |
| 3 | 659_Dd-T1-TRNA-1_B23MHV2LT4_1 | TCGACCAGCA | GTTCGAACTC | 1 | 23475069134 | 22315794696 | 914576100189 | 38.96 | 0.95 |
| 3 | 659_Dd-T1-TRNA-1_B23MHV2LT4_1 | TCGACCAGCA | GTTCGAACTC | 2 | 23475069134 | 22081467720 | 909943537827 | 38.76 | 0.94 |
| 3 | 659_cfy-T1-TRNA-1_B23MHV2LT4_1 | GTGACACGTC | CTTACACTGA | 1 | 16887400892 | 15869847598 | 653695510150 | 38.71 | 0.94 |
| 3 | 659_cfy-T1-TRNA-1_B23MHV2LT4_1 | GTGACACGTC | CTTACACTGA | 2 | 16887400892 | 15842014573 | 653626095886 | 38.70 | 0.94 |
| 3 | 659_bjQ-T1-TRNA-1_B23MHV2LT4_1 | AATGGACGCG | AAGTGCACCG | 1 | 13324906967 | 12523553818 | 515875505977 | 38.72 | 0.94 |
| 3 | 659_bjQ-T1-TRNA-1_B23MHV2LT4_1 | AATGGACGCG | AAGTGCACCG | 2 | 13324906967 | 12473060757 | 515212939581 | 38.67 | 0.94 |
| 3 | 659_bGc-T1-TRNA-1_B23MHV2LT4_1 | TCTCCGTACT | AGTTGTGATC | 1 | 12810306970 | 11805006638 | 490400552843 | 38.28 | 0.92 |
| 3 | 659_bGc-T1-TRNA-1_B23MHV2LT4_1 | TCTCCGTACT | AGTTGTGATC | 2 | 12810306970 | 11926516203 | 493831270866 | 38.55 | 0.93 |
| 3 | 659_dts-T1-TRNA-1_B23MHV2LT4_1 | TGGAAGCACA | TCCAACACCG | 1 | 13265802698 | 12285765315 | 509294082723 | 38.39 | 0.93 |
| 3 | 659_dts-T1-TRNA-1_B23MHV2LT4_1 | TGGAAGCACA | TCCAACACCG | 2 | 13265802698 | 12390295437 | 512315653848 | 38.62 | 0.93 |
| 3 | FFPE_HD789_02_RNA_0014_B23MHV2LT4_1 | GATAGACAAC | GTGTTCACGT | 1 | 14697962198 | 14016684312 | 573744379542 | 39.04 | 0.95 |
| 3 | FFPE_HD789_02_RNA_0014_B23MHV2LT4_1 | GATAGACAAC | GTGTTCACGT | 2 | 14697962198 | 13828936922 | 569749691216 | 38.76 | 0.94 |
| 3 | 659_wQ-T1-TRNA-1_B23MHV2LT4_1 | AGCGTCTCAT | CCTAGGCGAT | 1 | 13247410747 | 12620719800 | 517062842763 | 39.03 | 0.95 |
| 3 | 659_wQ-T1-TRNA-1_B23MHV2LT4_1 | AGCGTCTCAT | CCTAGGCGAT | 2 | 13247410747 | 12452755020 | 513256720170 | 38.74 | 0.94 |
| 3 | 659_cB6-T1-TRNA-1_B23MHV2LT4_1 | CTCTATACTG | CGTTCAACCG | 1 | 11285320824 | 10758788940 | 440452567995 | 39.03 | 0.95 |
| 3 | 659_cB6-T1-TRNA-1_B23MHV2LT4_1 | CTCTATACTG | CGTTCAACCG | 2 | 11285320824 | 10543470230 | 435785803928 | 38.62 | 0.93 |
| 3 | 659_cRa-T1-TRNA-1_B23MHV2LT4_1 | ATAGCCGGTT | TCTTATCCGG | 1 | 20188839373 | 18961505777 | 781324637228 | 38.70 | 0.94 |
| 3 | 659_cRa-T1-TRNA-1_B23MHV2LT4_1 | ATAGCCGGTT | TCTTATCCGG | 2 | 20188839373 | 18917081774 | 780918103316 | 38.68 | 0.94 |
| 3 | 659_cTi-T1-TRNA-1_B23MHV2LT4_1 | GTTCTCATCA | CCTCCATTCT | 1 | 17964553956 | 16684408313 | 690702399212 | 38.45 | 0.93 |
| 3 | 659_cTi-T1-TRNA-1_B23MHV2LT4_1 | GTTCTCATCA | CCTCCATTCT | 2 | 17964553956 | 16847779192 | 695184531133 | 38.70 | 0.94 |
| 3 | 659_d0M-T1-TRNA-1_B23MHV2LT4_1 | CAATGCGTGT | ATGTTCGCGC | 1 | 15162665 | 12149267 | 543366956 | 35.84 | 0.80 |
| 3 | 659_d0M-T1-TRNA-1_B23MHV2LT4_1 | CAATGCGTGT | ATGTTCGCGC | 2 | 15162665 | 10878814 | 523047403 | 34.50 | 0.72 |
| 3 | FFPE_V4_0001_RNA_0003_B23MHV2LT4_1 | TGAGTGTACA | ATTCGCCGGT | 1 | 18993879129 | 18042619349 | 739700887481 | 38.94 | 0.95 |
| 3 | FFPE_V4_0001_RNA_0003_B23MHV2LT4_1 | TGAGTGTACA | ATTCGCCGGT | 2 | 18993879129 | 17854317874 | 735799632436 | 38.74 | 0.94 |
| 3 | 659_cq5-T1-TRNA-1_B23MHV2LT4_1 | TGCTTCCAAG | CAGATGTTAC | 1 | 11079625 | 7082118 | 355005600 | 32.04 | 0.64 |
| 3 | 659_cq5-T1-TRNA-1_B23MHV2LT4_1 | TGCTTCCAAG | CAGATGTTAC | 2 | 11079625 | 7889082 | 381063363 | 34.39 | 0.71 |
| 3 | 659_bTq-T1-TRNA-1_B23MHV2LT4_1 | CCTACTCTGC | TGCAATTGGC | 1 | 20731851530 | 19643723422 | 806566681678 | 38.90 | 0.95 |
| 3 | 659_bTq-T1-TRNA-1_B23MHV2LT4_1 | CCTACTCTGC | TGCAATTGGC | 2 | 20731851530 | 19432134036 | 802116216099 | 38.69 | 0.94 |
| 3 | 659_cwv-T1-TRNA-1_B23MHV2LT4_1 | TCGCTGAGAG | AATGCTCTAG | 1 | 20351274905 | 19069319540 | 786398344049 | 38.64 | 0.94 |
| 3 | 659_cwv-T1-TRNA-1_B23MHV2LT4_1 | TCGCTGAGAG | AATGCTCTAG | 2 | 20351274905 | 19143140019 | 788896563444 | 38.76 | 0.94 |
| 3 | 659_bGW-T1-TRNA-1_B23MHV2LT4_1 | CGCTAATTGC | CCATCGCATT | 1 | 17597948455 | 16413766319 | 678586056674 | 38.56 | 0.93 |
| 3 | 659_bGW-T1-TRNA-1_B23MHV2LT4_1 | CGCTAATTGC | CCATCGCATT | 2 | 17597948455 | 16458663501 | 680127652386 | 38.65 | 0.94 |
| 3 | 659_dXa-T1-TRNA-1_B23MHV2LT4_1 | TCAGCTGTCA | ACAGCTCCTG | 1 | 13520955401 | 12591519576 | 520577089674 | 38.50 | 0.93 |
| 3 | 659_dXa-T1-TRNA-1_B23MHV2LT4_1 | TCAGCTGTCA | ACAGCTCCTG | 2 | 13520955401 | 12582308440 | 521057080255 | 38.54 | 0.93 |
| 3 | 659_dkd-T1-TRNA-1_B23MHV2LT4_1 | AGACGACAGA | GAGCTGGAAT | 1 | 6982844 | 4249347 | 219758643 | 31.47 | 0.61 |
| 3 | 659_dkd-T1-TRNA-1_B23MHV2LT4_1 | AGACGACAGA | GAGCTGGAAT | 2 | 6982844 | 5221226 | 245116853 | 35.10 | 0.75 |
| 3 | 659_eZ4-T1-TRNA-1_B23MHV2LT4_1 | TAGGTCCAGA | TGCTCATCCG | 1 | 10539187242 | 9965204871 | 409294184127 | 38.84 | 0.95 |
| 3 | 659_eZ4-T1-TRNA-1_B23MHV2LT4_1 | TAGGTCCAGA | TGCTCATCCG | 2 | 10539187242 | 9915965373 | 408565108602 | 38.77 | 0.94 |
| 3 | 659_eu1-T1-TRNA-1_B23MHV2LT4_1 | TAACCTGAAC | TCAATTGACG | 1 | 5183042384 | 4778762043 | 198816565110 | 38.36 | 0.92 |
| 3 | 659_eu1-T1-TRNA-1_B23MHV2LT4_1 | TAACCTGAAC | TCAATTGACG | 2 | 5183042384 | 4805108786 | 199458610223 | 38.48 | 0.93 |
| 3 | 659_dfA-T1-TRNA-1_B23MHV2LT4_1 | GATAGGTGAA | AGACGCAAGA | 1 | 19040576785 | 18045143417 | 740379581738 | 38.88 | 0.95 |
| 3 | 659_dfA-T1-TRNA-1_B23MHV2LT4_1 | GATAGGTGAA | AGACGCAAGA | 2 | 19040576785 | 17919617217 | 738184572501 | 38.77 | 0.94 |
| 3 | Undetermined | 1 | 41051446786 | 34718632590 | 1499992850985 | 36.54 | 0.85 | ||
| 3 | Undetermined | 2 | 41051446786 | 33683351234 | 1471031596364 | 35.83 | 0.82 |
99 rows