File Info
- Filename
- Quality_Metrics.csv
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- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L008/Reports/Quality_Metrics.csv
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- 9.9 KB
- Workflow Run
- dev_rna_exp09_10-73d51683
- Published
- Jun 07, 2026 11:41 PM
Content
View in new tab| Lane | SampleID | index | index2 | ReadNumber | Yield | YieldQ30 | QualityScoreSum | Mean Quality Score (PF) | % Q30 |
| 8 | 659_Fr-T1-TRNA-1_B23MHV2LT4_1 | CAACCATACA | ACCGGTTATA | 1 | 14921793424 | 14238126606 | 582209842380 | 39.02 | 0.95 |
| 8 | 659_Fr-T1-TRNA-1_B23MHV2LT4_1 | CAACCATACA | ACCGGTTATA | 2 | 14921793424 | 14081137792 | 579367787164 | 38.83 | 0.94 |
| 8 | 659_bQZ-T1-TRNA-1_B23MHV2LT4_1 | GTAGGCCGTT | GCCACTGTCT | 1 | 16105516701 | 15419263967 | 629934334709 | 39.11 | 0.96 |
| 8 | 659_bQZ-T1-TRNA-1_B23MHV2LT4_1 | GTAGGCCGTT | GCCACTGTCT | 2 | 16105516701 | 15252025504 | 626449110910 | 38.90 | 0.95 |
| 8 | 659_ezg-T1-TRNA-1_B23MHV2LT4_1 | CGGATTGATC | AGTCACAACA | 1 | 15975064479 | 15258607054 | 623953268338 | 39.06 | 0.96 |
| 8 | 659_ezg-T1-TRNA-1_B23MHV2LT4_1 | CGGATTGATC | AGTCACAACA | 2 | 15975064479 | 15138376042 | 621529855963 | 38.91 | 0.95 |
| 8 | 659_dRe-T1-TRNA-1_B23MHV2LT4_1 | ACTGGCAAGA | TGTTGTCCAT | 1 | 10501943847 | 10031676574 | 410016391381 | 39.04 | 0.96 |
| 8 | 659_dRe-T1-TRNA-1_B23MHV2LT4_1 | ACTGGCAAGA | TGTTGTCCAT | 2 | 10501943847 | 9953817149 | 408698549348 | 38.92 | 0.95 |
| 8 | 659_b7Z-T1-TRNA-1_B23MHV2LT4_1 | ACAAGAACCT | CGATACTGAA | 1 | 19956601222 | 19194594162 | 782415184938 | 39.21 | 0.96 |
| 8 | 659_b7Z-T1-TRNA-1_B23MHV2LT4_1 | ACAAGAACCT | CGATACTGAA | 2 | 19956601222 | 18932983854 | 776853485223 | 38.93 | 0.95 |
| 8 | 659_dQk-T1-TRNA-1_B23MHV2LT4_1 | AGAGTATGTG | AGATGGCTTC | 1 | 13391737 | 8529372 | 428683884 | 32.01 | 0.64 |
| 8 | 659_dQk-T1-TRNA-1_B23MHV2LT4_1 | AGAGTATGTG | AGATGGCTTC | 2 | 13391737 | 9669713 | 463614443 | 34.62 | 0.72 |
| 8 | 659_SP-T1-TRNA-1_B23MHV2LT4_1 | ACTTAGATCG | CGGAATTCTT | 1 | 15308174489 | 14501521260 | 594830370027 | 38.86 | 0.95 |
| 8 | 659_SP-T1-TRNA-1_B23MHV2LT4_1 | ACTTAGATCG | CGGAATTCTT | 2 | 15308174489 | 14458095758 | 594576001766 | 38.84 | 0.94 |
| 8 | 659_bTo-T1-TRNA-1_B23MHV2LT4_1 | GATCAACAAG | AAGCACTGTC | 1 | 13097656950 | 12479292334 | 510713070370 | 38.99 | 0.95 |
| 8 | 659_bTo-T1-TRNA-1_B23MHV2LT4_1 | GATCAACAAG | AAGCACTGTC | 2 | 13097656950 | 12355898011 | 508382942269 | 38.81 | 0.94 |
| 8 | 659_dHy-T1-TRNA-1_B23MHV2LT4_1 | ACCTTCGGAC | GACCGTAGAT | 1 | 13360410993 | 12880444152 | 524800749138 | 39.28 | 0.96 |
| 8 | 659_dHy-T1-TRNA-1_B23MHV2LT4_1 | ACCTTCGGAC | GACCGTAGAT | 2 | 13360410993 | 12674583455 | 520117795973 | 38.93 | 0.95 |
| 8 | FFPE_HD789_02_RNA_0015_B23MHV2LT4_1 | TATCATGTCG | TAATCTGCAC | 1 | 29273566529 | 28301802979 | 1151127092137 | 39.32 | 0.97 |
| 8 | FFPE_HD789_02_RNA_0015_B23MHV2LT4_1 | TATCATGTCG | TAATCTGCAC | 2 | 29273566529 | 27798884516 | 1140273609851 | 38.95 | 0.95 |
| 8 | 659_Mt-T1-TRNA-1_B23MHV2LT4_1 | CGTCTAGTAA | TTAATCCAGC | 1 | 11687527444 | 11066164382 | 453920880275 | 38.84 | 0.95 |
| 8 | 659_Mt-T1-TRNA-1_B23MHV2LT4_1 | CGTCTAGTAA | TTAATCCAGC | 2 | 11687527444 | 11040586468 | 454024608718 | 38.85 | 0.94 |
| 8 | 659_epZ-T1-TRNA-1_B23MHV2LT4_1 | TCTTAGGTGG | GATCACTGGT | 1 | 20099536312 | 19044053134 | 781327062955 | 38.87 | 0.95 |
| 8 | 659_epZ-T1-TRNA-1_B23MHV2LT4_1 | TCTTAGGTGG | GATCACTGGT | 2 | 20099536312 | 18799701128 | 776602858622 | 38.64 | 0.94 |
| 8 | 659_djb-T1-TRNA-1_B23MHV2LT4_1 | TCGACGTTGG | GATAAGTGTG | 1 | 12223948602 | 11550853679 | 474314216105 | 38.80 | 0.94 |
| 8 | 659_djb-T1-TRNA-1_B23MHV2LT4_1 | TCGACGTTGG | GATAAGTGTG | 2 | 12223948602 | 11463164466 | 472933667994 | 38.69 | 0.94 |
| 8 | 659_end-T1-TRNA-1_B23MHV2LT4_1 | AAGAGTACGA | GCAAGGACGT | 1 | 15689818080 | 15011078392 | 613173115873 | 39.08 | 0.96 |
| 8 | 659_end-T1-TRNA-1_B23MHV2LT4_1 | AAGAGTACGA | GCAAGGACGT | 2 | 15689818080 | 14892569350 | 611045643517 | 38.95 | 0.95 |
| 8 | 659_bKP-T1-TRNA-1_B23MHV2LT4_1 | CACGAGAAGT | GTCTGCGTAG | 1 | 11891743619 | 11309850476 | 463377487094 | 38.97 | 0.95 |
| 8 | 659_bKP-T1-TRNA-1_B23MHV2LT4_1 | CACGAGAAGT | GTCTGCGTAG | 2 | 11891743619 | 11214089766 | 461398958322 | 38.80 | 0.94 |
| 8 | 659_gK-T1-TRNA-1_B23MHV2LT4_1 | GACAATTAGC | CCGGTCATGA | 1 | 11397522431 | 10921652516 | 445835676437 | 39.12 | 0.96 |
| 8 | 659_gK-T1-TRNA-1_B23MHV2LT4_1 | GACAATTAGC | CCGGTCATGA | 2 | 11397522431 | 10803545030 | 443538859151 | 38.92 | 0.95 |
| 8 | 659_cuO-T1-TRNA-1_B23MHV2LT4_1 | TTCTACCGGC | TACTCGTAAG | 1 | 7275180 | 4906344 | 238616592 | 32.80 | 0.67 |
| 8 | 659_cuO-T1-TRNA-1_B23MHV2LT4_1 | TTCTACCGGC | TACTCGTAAG | 2 | 7275180 | 5259220 | 252053221 | 34.65 | 0.72 |
| 8 | 659_eHw-T1-TRNA-1_B23MHV2LT4_1 | GTGAGAGTAT | ATCTGTGAGG | 1 | 34538491381 | 33294273573 | 1356740498379 | 39.28 | 0.96 |
| 8 | 659_eHw-T1-TRNA-1_B23MHV2LT4_1 | GTGAGAGTAT | ATCTGTGAGG | 2 | 34538491381 | 32607665213 | 1341176883758 | 38.83 | 0.94 |
| 8 | FFPE_V4_0001_RNA_0003_B23MHV2LT4_2 | CTGGAGAATA | TCCATACAAC | 1 | 20962498896 | 20110238658 | 820787978664 | 39.16 | 0.96 |
| 8 | FFPE_V4_0001_RNA_0003_B23MHV2LT4_2 | CTGGAGAATA | TCCATACAAC | 2 | 20962498896 | 19894306647 | 816255551298 | 38.94 | 0.95 |
| 8 | 659_rd-T1-TRNA-1_B23MHV2LT4_1 | TGACAAGAGG | AATCTGTTGG | 1 | 8089593064 | 7773856966 | 316961766016 | 39.18 | 0.96 |
| 8 | 659_rd-T1-TRNA-1_B23MHV2LT4_1 | TGACAAGAGG | AATCTGTTGG | 2 | 8089593064 | 7701866841 | 315551882457 | 39.01 | 0.95 |
| 8 | 659_epP-T1-TRNA-1_B23MHV2LT4_1 | TGTTCGCTCT | ACTTGCGTGT | 1 | 19683301943 | 19000150610 | 773610655616 | 39.30 | 0.97 |
| 8 | 659_epP-T1-TRNA-1_B23MHV2LT4_1 | TGTTCGCTCT | ACTTGCGTGT | 2 | 19683301943 | 18655793739 | 765857978388 | 38.91 | 0.95 |
| 8 | 659_ciZ-T1-TRNA-1_B23MHV2LT4_1 | AGGTATTCGG | AGATGTGCGC | 1 | 10864103153 | 10297382019 | 422279677317 | 38.87 | 0.95 |
| 8 | 659_ciZ-T1-TRNA-1_B23MHV2LT4_1 | AGGTATTCGG | AGATGTGCGC | 2 | 10864103153 | 10231125400 | 421428364345 | 38.79 | 0.94 |
| 8 | 659_dKM-T1-TRNA-1_B23MHV2LT4_1 | ACGGCCTACA | TCTCACTCTA | 1 | 12466052942 | 11831648592 | 484949633244 | 38.90 | 0.95 |
| 8 | 659_dKM-T1-TRNA-1_B23MHV2LT4_1 | ACGGCCTACA | TCTCACTCTA | 2 | 12466052942 | 11792843479 | 484585771408 | 38.87 | 0.95 |
| 8 | 659_eeB-T1-TRNA-1_B23MHV2LT4_1 | CACGTAAGAG | TCAATCCGCG | 1 | 7715194 | 4849648 | 245569099 | 31.83 | 0.63 |
| 8 | 659_eeB-T1-TRNA-1_B23MHV2LT4_1 | CACGTAAGAG | TCAATCCGCG | 2 | 7715194 | 5594370 | 268407825 | 34.79 | 0.73 |
| 8 | 659_buj-T1-TRNA-1_B23MHV2LT4_1 | AATCGAACTC | ACGAACCTTA | 1 | 12116542 | 7730097 | 387531942 | 31.98 | 0.64 |
| 8 | 659_buj-T1-TRNA-1_B23MHV2LT4_1 | AATCGAACTC | ACGAACCTTA | 2 | 12116542 | 7846696 | 398820853 | 32.92 | 0.65 |
| 8 | 659_cGW-T1-TRNA-1_B23MHV2LT4_1 | AGGCTGGAGA | CAACTGTCAT | 1 | 3650940967 | 3451231937 | 141730740713 | 38.82 | 0.95 |
| 8 | 659_cGW-T1-TRNA-1_B23MHV2LT4_1 | AGGCTGGAGA | CAACTGTCAT | 2 | 3650940967 | 3419188375 | 141140955862 | 38.66 | 0.94 |
| 8 | 659_cAd-T1-TRNA-1_B23MHV2LT4_1 | TAAGCCACGC | TTACGAACGA | 1 | 11274560715 | 10672302947 | 438270306533 | 38.87 | 0.95 |
| 8 | 659_cAd-T1-TRNA-1_B23MHV2LT4_1 | TAAGCCACGC | TTACGAACGA | 2 | 11274560715 | 10616378854 | 437236111732 | 38.78 | 0.94 |
| 8 | 659_cRB-T1-TRNA-1_B23MHV2LT4_1 | TCAATCAGAG | GACTCTGGTT | 1 | 7177664351 | 6739193858 | 277421577491 | 38.65 | 0.94 |
| 8 | 659_cRB-T1-TRNA-1_B23MHV2LT4_1 | TCAATCAGAG | GACTCTGGTT | 2 | 7177664351 | 6760210120 | 278437938409 | 38.79 | 0.94 |
| 8 | 659_bIB-T1-TRNA-1_B23MHV2LT4_1 | AACATAAGGC | GTTAGCTTAG | 1 | 14250541044 | 13704560876 | 558760002377 | 39.21 | 0.96 |
| 8 | 659_bIB-T1-TRNA-1_B23MHV2LT4_1 | AACATAAGGC | GTTAGCTTAG | 2 | 14250541044 | 13518086575 | 554783829961 | 38.93 | 0.95 |
| 8 | 659_zO-T1-TRNA-1_B23MHV2LT4_1 | TTGCAATGCG | CGAGACTTCA | 1 | 13567042111 | 12923234363 | 529026480527 | 38.99 | 0.95 |
| 8 | 659_zO-T1-TRNA-1_B23MHV2LT4_1 | TTGCAATGCG | CGAGACTTCA | 2 | 13567042111 | 12823244621 | 527176893431 | 38.86 | 0.95 |
| 8 | 659_dcz-T1-TRNA-1_B23MHV2LT4_1 | AACCGGCCTT | TGTTCAGATC | 1 | 6158777204 | 5679729245 | 235736632565 | 38.28 | 0.92 |
| 8 | 659_dcz-T1-TRNA-1_B23MHV2LT4_1 | AACCGGCCTT | TGTTCAGATC | 2 | 6158777204 | 5744908171 | 237698189848 | 38.60 | 0.93 |
| 8 | 659_bUs-T1-TRNA-1_B23MHV2LT4_1 | CATTATCGCT | CGAGTTGCTT | 1 | 18235874229 | 17587445843 | 716067242465 | 39.27 | 0.96 |
| 8 | 659_bUs-T1-TRNA-1_B23MHV2LT4_1 | CATTATCGCT | CGAGTTGCTT | 2 | 18235874229 | 17340701741 | 710789570531 | 38.98 | 0.95 |
| 8 | 659_bMa-T1-TRNA-1_B23MHV2LT4_1 | CATTGAGCTA | ACTTCACATC | 1 | 6219904873 | 5768805654 | 238737993342 | 38.38 | 0.93 |
| 8 | 659_bMa-T1-TRNA-1_B23MHV2LT4_1 | CATTGAGCTA | ACTTCACATC | 2 | 6219904873 | 5807639127 | 240147939594 | 38.61 | 0.93 |
| 8 | 659_b4x-T1-TRNA-1_B23MHV2LT4_1 | CTTCGGAATC | CGTCGGTAAG | 1 | 2744243951 | 2521079051 | 104815988219 | 38.19 | 0.92 |
| 8 | 659_b4x-T1-TRNA-1_B23MHV2LT4_1 | CTTCGGAATC | CGTCGGTAAG | 2 | 2744243951 | 2543233695 | 105488392110 | 38.44 | 0.93 |
| 8 | 659_dc8-T1-TRNA-1_B23MHV2LT4_1 | AACCACACTA | CCTCTGCTGA | 1 | 18051366574 | 17249401156 | 704910229972 | 39.05 | 0.96 |
| 8 | 659_dc8-T1-TRNA-1_B23MHV2LT4_1 | AACCACACTA | CCTCTGCTGA | 2 | 18051366574 | 17100824214 | 702196095405 | 38.90 | 0.95 |
| 8 | 659_cWx-T1-TRNA-1_B23MHV2LT4_1 | GTACAGCGGA | CAATCTGTGT | 1 | 13840629800 | 13228513762 | 540608420938 | 39.06 | 0.96 |
| 8 | 659_cWx-T1-TRNA-1_B23MHV2LT4_1 | GTACAGCGGA | CAATCTGTGT | 2 | 13840629800 | 13060785700 | 537305800276 | 38.82 | 0.94 |
| 8 | 659_cVw-T1-TRNA-1_B23MHV2LT4_1 | ACTTCAACAG | GCGTGAGCAT | 1 | 18999620300 | 18300232090 | 745560606742 | 39.24 | 0.96 |
| 8 | 659_cVw-T1-TRNA-1_B23MHV2LT4_1 | ACTTCAACAG | GCGTGAGCAT | 2 | 18999620300 | 18035774688 | 739948078521 | 38.95 | 0.95 |
| 8 | 659_dm4-T1-TRNA-1_B23MHV2LT4_1 | TGGACAATAG | GAGTCCTGTG | 1 | 7237572997 | 6754826257 | 278890813177 | 38.53 | 0.93 |
| 8 | 659_dm4-T1-TRNA-1_B23MHV2LT4_1 | TGGACAATAG | GAGTCCTGTG | 2 | 7237572997 | 6805501020 | 280484293659 | 38.75 | 0.94 |
| 8 | 659_epG-T1-TRNA-1_B23MHV2LT4_1 | TCACACGGAT | CTTCTGATCG | 1 | 15389446011 | 14711604764 | 601447203947 | 39.08 | 0.96 |
| 8 | 659_epG-T1-TRNA-1_B23MHV2LT4_1 | TCACACGGAT | CTTCTGATCG | 2 | 15389446011 | 14568841330 | 598441571149 | 38.89 | 0.95 |
| 8 | 659_6i-T1-TRNA-1_B23MHV2LT4_1 | AGGATACGGT | AACCACGTCA | 1 | 8180360674 | 7666470071 | 316203494708 | 38.65 | 0.94 |
| 8 | 659_6i-T1-TRNA-1_B23MHV2LT4_1 | AGGATACGGT | AACCACGTCA | 2 | 8180360674 | 7663793569 | 316393315084 | 38.68 | 0.94 |
| 8 | 659_e0S-T1-TRNA-1_B23MHV2LT4_1 | GCTACAGGTC | TTATGCAGGA | 1 | 8722968 | 5809826 | 284654183 | 32.63 | 0.67 |
| 8 | 659_e0S-T1-TRNA-1_B23MHV2LT4_1 | GCTACAGGTC | TTATGCAGGA | 2 | 8722968 | 6427287 | 305385939 | 35.01 | 0.74 |
| 8 | 659_egp-T1-TRNA-1_B23MHV2LT4_1 | GCCAAGTAAC | TGCGTGATGA | 1 | 7371820 | 4887831 | 239954481 | 32.55 | 0.66 |
| 8 | 659_egp-T1-TRNA-1_B23MHV2LT4_1 | GCCAAGTAAC | TGCGTGATGA | 2 | 7371820 | 5449010 | 258389795 | 35.05 | 0.74 |
| 8 | 659_bCu-T1-TRNA-1_B23MHV2LT4_1 | TTGTGAAGGC | TCGTCAGTAC | 1 | 9747107229 | 9140995000 | 376866222391 | 38.66 | 0.94 |
| 8 | 659_bCu-T1-TRNA-1_B23MHV2LT4_1 | TTGTGAAGGC | TCGTCAGTAC | 2 | 9747107229 | 9096736620 | 376151620206 | 38.59 | 0.93 |
| 8 | 659_cIX-T1-TRNA-1_B23MHV2LT4_1 | GTCGACTCCT | TGCCGTTAGC | 1 | 16674178171 | 15908110560 | 650885290713 | 39.04 | 0.95 |
| 8 | 659_cIX-T1-TRNA-1_B23MHV2LT4_1 | GTCGACTCCT | TGCCGTTAGC | 2 | 16674178171 | 15735583981 | 647292674260 | 38.82 | 0.94 |
| 8 | 659_bua-T1-TRNA-1_B23MHV2LT4_1 | CTGAGCTTGT | CTTCTTGCGT | 1 | 17876874900 | 17089054395 | 699043556496 | 39.10 | 0.96 |
| 8 | 659_bua-T1-TRNA-1_B23MHV2LT4_1 | CTGAGCTTGT | CTTCTTGCGT | 2 | 17876874900 | 16906658639 | 694853047916 | 38.87 | 0.95 |
| 8 | 659_ePR-T1-TRNA-1_B23MHV2LT4_1 | CCTCTGTCAT | CGTATCGATT | 1 | 16855587608 | 16173605488 | 660321795460 | 39.18 | 0.96 |
| 8 | 659_ePR-T1-TRNA-1_B23MHV2LT4_1 | CCTCTGTCAT | CGTATCGATT | 2 | 16855587608 | 15947805737 | 655211804528 | 38.87 | 0.95 |
| 8 | 659_Wm-T1-TRNA-1_B23MHV2LT4_1 | GCAGATGTAA | TACACGCCTC | 1 | 13725598 | 8719405 | 438910048 | 31.98 | 0.64 |
| 8 | 659_Wm-T1-TRNA-1_B23MHV2LT4_1 | GCAGATGTAA | TACACGCCTC | 2 | 13725598 | 9096057 | 459626163 | 33.49 | 0.66 |
| 8 | NTC_0001_0001_B23MHV2LT4_2 | CTCATCATCT | TAAGCCTCTA | 1 | 9842029 | 6474332 | 319206833 | 32.43 | 0.66 |
| 8 | NTC_0001_0001_B23MHV2LT4_2 | CTCATCATCT | TAAGCCTCTA | 2 | 9842029 | 6884657 | 337083482 | 34.25 | 0.70 |
| 8 | Undetermined | 1 | 40117809256 | 32432130786 | 1429591313553 | 35.63 | 0.81 | ||
| 8 | Undetermined | 2 | 40117809256 | 31217890942 | 1394370568093 | 34.76 | 0.78 |
99 rows