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659_dc8-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/659_dc8-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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dev_rna_exp09_10-73d51683
Published
Jun 08, 2026 4:34 AM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
SND1--BRAF 1366 35 1366.00 32.95 SND1^ENSG00000197157.11 20479 chr7:127904819:+ BRAF^ENSG00000157764.14 55981 chr7:140787584:- ONLY_REF_SPLICE YES 1917 776 0.73 1.80 GT 1.9329 AG 1.9329 4.7271 2172 0
SND1--BRAF 22 35 22.00 0.53 SND1^ENSG00000197157.11 24964 chr7:127991056:+ BRAF^ENSG00000157764.14 49278 chr7:140808995:- ONLY_REF_SPLICE YES 2264 916 0.03 0.06 GT 1.8295 AG 1.9656 0.0761 1260 0
SND1--BRAF 19 35 19.00 0.46 SND1^ENSG00000197157.11 22748 chr7:127929329:+ BRAF^ENSG00000157764.14 54821 chr7:140794467:- ONLY_REF_SPLICE YES 1975 841 0.03 0.07 GT 1.7819 AG 1.7465 0.0658 2389 0
SND1--BRAF 15 35 15.00 0.36 SND1^ENSG00000197157.11 22748 chr7:127929329:+ BRAF^ENSG00000157764.14 49278 chr7:140808995:- ONLY_REF_SPLICE YES 1975 916 0.03 0.06 GT 1.7819 AG 1.9656 0.0519 2200 0
SND1--BRAF 8 35 8.00 0.19 SND1^ENSG00000197157.11 34480 chr7:128087029:+ BRAF^ENSG00000157764.14 44594 chr7:140834718:- INCL_NON_REF_SPLICE YES 3406 1544 0.01 0.03 CT 1.9329 AC 1.6895 0.0276 1417 0
SND1--BRAF 4 35 4.00 0.10 SND1^ENSG00000197157.11 22748 chr7:127929329:+ BRAF^ENSG00000157764.14 44609 chr7:140834703:- ONLY_REF_SPLICE YES 1975 1479 0.02 0.03 GT 1.7819 AG 1.5656 0.0138 1285 0
SND1--BRAF 4 35 4.00 0.10 SND1^ENSG00000197157.11 37266 chr7:128092263:+ BRAF^ENSG00000157764.14 44684 chr7:140834628:- INCL_NON_REF_SPLICE YES 461 989 0.09 0.04 TG 1.8256 GC 1.4566 0.0138 265 0
SND1--BRAF 3 35 3.00 0.07 SND1^ENSG00000197157.11 32300 chr7:128084849:+ BRAF^ENSG00000157764.14 54827 chr7:140794461:- INCL_NON_REF_SPLICE YES 2730 888 0.01 0.04 AA 1.5656 CA 1.8062 0.0103 3613 0
SND1--BRAF 3 33 3.00 0.07 SND1^ENSG00000197157.11 20474 chr7:127904814:+ BRAF^ENSG00000157764.14 55978 chr7:140787587:- INCL_NON_REF_SPLICE YES 2051 736 0.02 0.05 CT 1.8062 TG 1.8256 0.0103 2175 0
SND1--BRAF 2 35 2.00 0.05 SND1^ENSG00000197157.11 22748 chr7:127929329:+ BRAF^ENSG00000157764.14 51314 chr7:140801560:- ONLY_REF_SPLICE YES 1975 1153 0.02 0.03 GT 1.7819 AG 1.8892 0.007 1724 0
SND1--BRAF 1 35 1.00 0.02 SND1^ENSG00000197157.11 24964 chr7:127991056:+ BRAF^ENSG00000157764.14 44609 chr7:140834703:- ONLY_REF_SPLICE YES 2264 1479 0.02 0.03 GT 1.8295 AG 1.5656 0.0035 1109 0
SND1--BRAF 1 35 1.00 0.02 SND1^ENSG00000197157.11 24964 chr7:127991056:+ BRAF^ENSG00000157764.14 54821 chr7:140794467:- ONLY_REF_SPLICE NO 2264 841 0.02 0.04 GT 1.8295 AG 1.7465 0.0035 2426 0
SND1--BRAF 1 35 1.00 0.02 SND1^ENSG00000197157.11 22748 chr7:127929329:+ BRAF^ENSG00000157764.14 44440 chr7:140834872:- ONLY_REF_SPLICE YES 1975 898 0.02 0.04 GT 1.7819 AG 1.9219 0.0035 1232 0
SND1--BRAF 4 13 4.00 0.04 SND1^ENSG00000197157.11 19014 chr7:127888012:+ BRAF^ENSG00000157764.14 55981 chr7:140787584:- ONLY_REF_SPLICE YES 2373 776 0.01 0.02 GT 1.8892 AG 1.9329 0.0136 2558 0
SND1--BRAF 4 4 4.00 0.01 SND1^ENSG00000197157.11 19014 chr7:127888012:+ BRAF^ENSG00000157764.14 58445 chr7:140783157:- ONLY_REF_SPLICE YES 2373 1155 0.00 0.01 GT 1.8892 AG 1.9656 0.0135 1384 0
SND1--BRAF 1 15 1.00 0.01 SND1^ENSG00000197157.11 20479 chr7:127904819:+ BRAF^ENSG00000157764.14 58445 chr7:140783157:- ONLY_REF_SPLICE YES 1917 1155 0.01 0.01 GT 1.9329 AG 1.9656 0.0034 302 0
SND1--BRAF 4 0 4.00 0.00 SND1^ENSG00000197157.11 18945 chr7:127887943:+ BRAF^ENSG00000157764.14 58445 chr7:140783157:- INCL_NON_REF_SPLICE YES 2702 1155 0.00 0.00 GA 1.9899 AG 1.9656 0.0135 1452 0
SND1--BRAF 3 0 3.00 0.00 SND1^ENSG00000197157.11 16798 chr7:127807569:+ BRAF^ENSG00000157764.14 58500 chr7:140783102:- INCL_NON_REF_SPLICE YES 2775 1481 0.00 0.00 GA 1.8062 AC 1.9656 0.0101 3587 0
SND1--BRAF 3 0 3.00 0.00 SND1^ENSG00000197157.11 17847 chr7:127844368:+ BRAF^ENSG00000157764.14 62467 chr7:140778077:- INCL_NON_REF_SPLICE YES 3076 1260 0.00 0.00 GA 1.4566 TT 1.7465 0.0101 3358 0
SND1--BRAF 3 0 3.00 0.00 SND1^ENSG00000197157.11 20479 chr7:127904819:+ BRAF^ENSG00000157764.14 73263 chr7:140739946:- ONLY_REF_SPLICE YES 1917 906 0.00 0.00 GT 1.9329 AG 1.4566 0.0101 1612 0
SND1--BRAF 3 0 3.00 0.00 SND1^ENSG00000197157.11 20479 chr7:127904819:+ BRAF^ENSG00000157764.14 59582 chr7:140781693:- ONLY_REF_SPLICE YES 1917 1616 0.00 0.00 GT 1.9329 AG 1.8295 0.0101 1425 0
BRAF--SND1 938 22 938.00 21.74 BRAF^ENSG00000157764.14 15368 chr7:140794308:- SND1^ENSG00000197157.11 71688 chr7:127929188:+ ONLY_REF_SPLICE YES 962 1952 1.00 0.49 GT 1.8892 AG 1.6402 3.243 2595 0
BRAF--SND1 8 22 8.00 0.19 BRAF^ENSG00000157764.14 15368 chr7:140794308:- SND1^ENSG00000197157.11 70561 chr7:127928060:+ ONLY_REF_SPLICE YES 962 1735 0.03 0.02 GT 1.8892 AG 1.8892 0.0276 3273 0
BRAF--SND1 3 22 3.00 0.07 BRAF^ENSG00000157764.14 46173 chr7:140720235:- SND1^ENSG00000197157.11 62465 chr7:127707638:+ INCL_NON_REF_SPLICE NO 0 4060 26.00 0.01 TG 1.9086 TT 1.8892 0.0103 1076 0
BRAF--SND1 1 0 1.00 0.00 BRAF^ENSG00000157764.14 12900 chr7:140800362:- SND1^ENSG00000197157.11 71688 chr7:127929188:+ ONLY_REF_SPLICE YES 835 1952 0.00 0.00 GT 1.9329 AG 1.6402 0.0034 1214 0
BRAF--SND1 1 0 1.00 0.00 BRAF^ENSG00000157764.14 5091 chr7:140834609:- SND1^ENSG00000197157.11 78925 chr7:128074502:+ ONLY_REF_SPLICE YES 962 2139 0.00 0.00 GT 1.6895 AG 1.2419 0.0034 1079 0
GGA2--PET100 873 5 873.00 5.00 GGA2^ENSG00000103365.15 11940 chr16:23482923:- PET100^ENSG00000229833.10 27772 chr19:7630624:+ INCL_NON_REF_SPLICE YES 316 748 2.77 1.17 GT 1.9899 AG 1.7968 2.9668 1180 0
PRKDC--UCN3 607 3 607.00 3.00 PRKDC^ENSG00000253729.8 30128 chr8:47893139:- UCN3^ENSG00000178473.7 90003 chr10:5373715:+ ONLY_REF_SPLICE YES 1282 19 0.48 30.55 GT 1.8892 AG 1.7465 2.0612 76 1
STX16--NPEPL1 262 6 262.00 6.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 1825 117 0.15 2.28 GT 1.7968 AG 1.8256 0.9056 1940 0
STX16--NPEPL1 3 0 3.00 0.00 STX16^ENSG00000124222.22 1835 chr20:58652087:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 2848 117 0.00 0.03 GT 1.9899 AG 1.8256 0.0101 1258 0
STX16--NPEPL1 2 0 2.00 0.00 STX16^ENSG00000124222.22 7774 chr20:58671297:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 1635 117 0.00 0.03 GT 1.8062 AG 1.8256 0.0068 2729 0
STX16--NPEPL1 1 0 1.00 0.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 21146 chr20:58698684:+ ONLY_REF_SPLICE YES 1825 1179 0.00 0.00 GT 1.7968 AG 1.9899 0.0034 2583 0
STX16--NPEPL1 1 0 1.00 0.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 19290 chr20:58693737:+ ONLY_REF_SPLICE YES 1825 2046 0.00 0.00 GT 1.7968 AG 1.7819 0.0034 1248 0
PCDHGB2--PCDHGC4 250 0 250.00 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 0 251.00 251.00 GT 1.7819 AG 1.3383 0.8448 1585 0
TLK2P1--AC110079.1 88 0 82.54 0.00 TLK2P1^ENSG00000226049.3 1830 chr17:34039043:- AC110079.1^ENSG00000260404.3 8316 chr4:118595912:+ INCL_NON_REF_SPLICE YES 47 62 1.85 1.41 GT 1.7465 AG 1.8892 0.2789 311 0
TLK2--AC240565.1 87 0 81.46 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 543 27 0.16 3.14 GT 1.8892 AG 1.8892 0.2753 1734 0
CAST--LIX1-AS1 82 1 82.00 1.00 CAST^ENSG00000153113.24 41746 chr5:96767999:+ LIX1-AS1^ENSG00000251513.2 54881 chr5:97101759:+ ONLY_REF_SPLICE YES 849 0 0.10 84.00 GT 1.4566 AG 1.7968 0.2805 2603 0
CAST--LIX1-AS1 10 0 10.00 0.00 CAST^ENSG00000153113.24 41746 chr5:96767999:+ LIX1-AS1^ENSG00000251513.2 57217 chr5:97183008:+ ONLY_REF_SPLICE YES 849 51 0.01 0.21 GT 1.4566 AG 1.6402 0.0338 832 0
CAST--LIX1-AS1 3 0 3.00 0.00 CAST^ENSG00000153113.24 41746 chr5:96767999:+ LIX1-AS1^ENSG00000251513.2 58879 chr5:97431744:+ ONLY_REF_SPLICE YES 849 2 0.00 1.33 GT 1.4566 AG 1.5850 0.0101 1119 0
TVP23C--CDRT4 70 1 70.00 1.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 118 7 0.61 9.00 GT 1.9329 AG 1.9899 0.2399 1215 0
TVP23C--CDRT4 26 0 26.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 290 7 0.09 3.38 GT 1.8323 AG 1.9899 0.0879 2126 0
TVP23C--CDRT4 24 0 24.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 118 37 0.21 0.66 GT 1.9329 AG 1.6402 0.0811 137 0
TVP23C--CDRT4 12 0 12.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 290 37 0.04 0.34 GT 1.8323 AG 1.6402 0.0405 1363 0
TVP23C--CDRT4 11 0 11.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 219 7 0.05 1.50 GT 1.9086 AG 1.9899 0.0372 1774 0
TVP23C--CDRT4 7 0 7.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 13 7 0.57 1.00 GT 1.8892 AG 1.9899 0.0237 1949 0
TVP23C--CDRT4 4 0 4.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 219 37 0.02 0.13 GT 1.9086 AG 1.6402 0.0135 697 0
TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 13 37 0.21 0.08 GT 1.8892 AG 1.6402 0.0068 873 0
CRYZL2P--SEC16B 32 3 32.00 2.67 CRYZL2P^ENSG00000242193.11 8825 chr1:178026155:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 2 21 12.00 1.64 GT 1.9086 AG 1.5546 0.1171 2589 0
CRYZL2P--SEC16B 3 3 3.00 0.25 CRYZL2P^ENSG00000242193.11 11220 chr1:178022440:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 0 21 7.00 0.32 GT 1.9656 AG 1.5546 0.0109 2635 0
CRYZL2P--SEC16B 3 0 3.00 0.00 CRYZL2P^ENSG00000242193.11 8825 chr1:178026155:- SEC16B^ENSG00000120341.18 26248 chr1:177958975:- ONLY_REF_SPLICE YES 2 243 1.33 0.02 GT 1.9086 AG 1.7465 0.0101 3251 0
CRYZL2P--SEC16B 1 3 1.00 0.08 CRYZL2P^ENSG00000242193.11 9991 chr1:178024404:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 2 21 1.67 0.23 GT 1.6895 AG 1.5546 0.0037 2356 0
SMG6--AC006435.2 31 1 31.00 0.76 SMG6^ENSG00000070366.14 22176 chr17:2172658:- AC006435.2^ENSG00000263345.1 41596 chr17:2376852:- ONLY_REF_SPLICE YES 269 75 0.12 0.43 GT 1.8295 AG 1.9219 0.1073 808 0
SMG6--AC006435.2 10 1 10.00 0.24 SMG6^ENSG00000070366.14 22176 chr17:2172658:- AC006435.2^ENSG00000263345.1 42756 chr17:2375692:- ONLY_REF_SPLICE YES 269 1109 0.04 0.01 GT 1.8295 AG 1.9329 0.0346 1069 0
SMG6--AC006435.2 2 0 2.00 0.00 SMG6^ENSG00000070366.14 20655 chr17:2186663:- AC006435.2^ENSG00000263345.1 41596 chr17:2376852:- ONLY_REF_SPLICE YES 435 75 0.01 0.04 GT 1.8892 AG 1.9219 0.0068 1682 0
KLRC4--KLRK1 27 0 27.00 0.00 KLRC4^ENSG00000183542.5 3122 chr12:10407636:- KLRK1^ENSG00000213809.9 8583 chr12:10388875:- INCL_NON_REF_SPLICE YES 19 46 1.40 0.60 GT 1.3996 AG 1.9219 0.0912 1207 0
BMS1P7--AGAP13P 25 2 25.00 2.00 BMS1P7^ENSG00000270025.2 7575 chr10:48050282:- AGAP13P^ENSG00000243289.1 10611 chr10:46816551:+ INCL_NON_REF_SPLICE YES 0 155 28.00 0.18 GT 1.7465 AG 1.9329 0.0913 10000 0
BMS1P7--AGAP13P 2 0 2.00 0.00 BMS1P7^ENSG00000270025.2 7575 chr10:48050282:- AGAP13P^ENSG00000243289.1 11799 chr10:46819468:+ ONLY_REF_SPLICE YES 0 65 3.00 0.05 GT 1.7465 AG 1.9219 0.0068 10000 0
AC136431.1--PKD1P5 22 0 22.00 0.00 AC136431.1^ENSG00000260126.2 1087 chr16:16499619:+ PKD1P5^ENSG00000254681.6 10372 chr16:18395957:- ONLY_REF_SPLICE YES 0 1505 23.00 0.02 GT 1.9899 AG 1.8323 0.0743 4688 0
59 rows