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659_ezg-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/659_ezg-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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10.6 KB
Workflow Run
dev_rna_exp09_10-73d51683
Published
Jun 08, 2026 4:42 AM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
AGAP3--BRAF 1669 11 1669.00 10.82 AGAP3^ENSG00000133612.19 11739 chr7:151120145:+ BRAF^ENSG00000157764.14 45682 chr7:140787584:- ONLY_REF_SPLICE YES 236 361 7.09 4.64 GT 1.8062 AG 1.9329 5.6721 1093 0
AGAP3--BRAF 25 11 25.00 0.16 AGAP3^ENSG00000133612.19 12339 chr7:151120745:+ BRAF^ENSG00000157764.14 45682 chr7:140787584:- ONLY_REF_SPLICE YES 156 361 0.24 0.10 GT 1.6895 AG 1.9329 0.0849 1042 0
AGAP3--BRAF 18 0 18.00 0.00 AGAP3^ENSG00000133612.19 10226 chr7:151118632:+ BRAF^ENSG00000157764.14 45682 chr7:140787584:- ONLY_REF_SPLICE YES 764 361 0.02 0.05 GT 1.9086 AG 1.9329 0.0608 1770 0
AGAP3--BRAF 1 11 1.00 0.01 AGAP3^ENSG00000133612.19 16141 chr7:151128684:+ BRAF^ENSG00000157764.14 34310 chr7:140834703:- ONLY_REF_SPLICE NO 139 659 0.09 0.02 GT 1.7232 AG 1.5656 0.0034 3392 0
AGAP3--BRAF 1 11 1.00 0.01 AGAP3^ENSG00000133612.19 16141 chr7:151128684:+ BRAF^ENSG00000157764.14 44574 chr7:140794415:- ONLY_REF_SPLICE YES 139 513 0.09 0.03 GT 1.7232 AG 1.7232 0.0034 1745 0
AGAP3--BRAF 1 0 1.00 0.00 AGAP3^ENSG00000133612.19 11739 chr7:151120145:+ BRAF^ENSG00000157764.14 49283 chr7:140781693:- ONLY_REF_SPLICE YES 236 1342 0.01 0.00 GT 1.8062 AG 1.8295 0.0034 1269 0
DIS3L--MAP2K1 202 1 202.00 1.00 DIS3L^ENSG00000166938.13 2925 chr15:66295141:+ MAP2K1^ENSG00000169032.10 24240 chr15:66435027:+ ONLY_REF_SPLICE YES 158 377 1.28 0.54 GT 1.7056 AG 1.9329 0.6855 1092 0
CHCHD6--EPB41L1 154 0 154.00 0.00 CHCHD6^ENSG00000159685.11 4484 chr3:126733222:+ EPB41L1^ENSG00000088367.23 49110 chr20:36212272:+ ONLY_REF_SPLICE YES 33 250 4.56 0.62 GT 1.9656 AG 1.7465 0.52 4399 0
CHCHD6--EPB41L1 30 0 30.00 0.00 CHCHD6^ENSG00000159685.11 4484 chr3:126733222:+ EPB41L1^ENSG00000088367.23 47699 chr20:36209488:+ ONLY_REF_SPLICE YES 33 207 0.91 0.15 GT 1.9656 AG 1.6402 0.1013 3058 0
CHCHD6--EPB41L1 1 0 1.00 0.00 CHCHD6^ENSG00000159685.11 9909 chr3:126935186:+ EPB41L1^ENSG00000088367.23 29981 chr20:36173764:+ ONLY_REF_SPLICE YES 88 185 0.02 0.01 GT 1.9656 AG 1.9086 0.0034 1244 0
CHCHD6--EPB41L1 1 0 1.00 0.00 CHCHD6^ENSG00000159685.11 6662 chr3:126852730:+ EPB41L1^ENSG00000088367.23 23469 chr20:36112426:+ ONLY_REF_SPLICE YES 67 56 0.03 0.04 GT 1.7819 AG 1.9656 0.0034 6345 0
CHCHD6--EPB41L1 1 0 1.00 0.00 CHCHD6^ENSG00000159685.11 5575 chr3:126780430:+ EPB41L1^ENSG00000088367.23 29981 chr20:36173764:+ ONLY_REF_SPLICE YES 35 185 0.06 0.01 GT 1.5656 AG 1.9086 0.0034 5422 0
BRAF--AGAP3 149 0 149.00 0.00 BRAF^ENSG00000157764.14 15368 chr7:140794308:- AGAP3^ENSG00000133612.19 63778 chr7:151123794:+ ONLY_REF_SPLICE YES 452 147 0.33 1.01 GT 1.8892 AG 1.8892 0.5031 338 0
BRAF--AGAP3 23 0 23.00 0.00 BRAF^ENSG00000157764.14 15368 chr7:140794308:- AGAP3^ENSG00000133612.19 62709 chr7:151122725:+ ONLY_REF_SPLICE YES 452 180 0.05 0.13 GT 1.8892 AG 1.9219 0.0777 739 0
BRAF--AGAP3 4 0 4.00 0.00 BRAF^ENSG00000157764.14 33753 chr7:140739844:- AGAP3^ENSG00000133612.19 58423 chr7:151117748:+ INCL_NON_REF_SPLICE YES 983 915 0.01 0.01 AG 1.8892 CG 1.8892 0.0135 942 0
BRAF--AGAP3 3 0 3.00 0.00 BRAF^ENSG00000157764.14 24020 chr7:140776912:- AGAP3^ENSG00000133612.19 60662 chr7:151119987:+ ONLY_REF_SPLICE YES 538 673 0.01 0.01 GT 1.8892 AG 1.7819 0.0101 1392 0
STX16--NPEPL1 91 0 91.00 0.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 1154 34 0.08 2.63 GT 1.7968 AG 1.8256 0.3073 1940 0
STX16--NPEPL1 4 0 4.00 0.00 STX16^ENSG00000124222.22 7774 chr20:58671297:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 965 34 0.01 0.14 GT 1.8062 AG 1.8256 0.0135 2729 0
STX16--NPEPL1 2 0 2.00 0.00 STX16^ENSG00000124222.22 1835 chr20:58652087:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 1280 34 0.00 0.09 GT 1.9899 AG 1.8256 0.0068 1258 0
EPB41L1--CHCHD6 87 0 87.00 0.00 EPB41L1^ENSG00000088367.23 24193 chr20:36198041:+ CHCHD6^ENSG00000159685.11 49005 chr3:126852647:+ ONLY_REF_SPLICE YES 197 47 0.44 1.83 GT 1.6895 AG 1.6729 0.2938 2473 0
EPB41L1--CHCHD6 40 0 40.00 0.00 EPB41L1^ENSG00000088367.23 24193 chr20:36198041:+ CHCHD6^ENSG00000159685.11 49002 chr3:126852644:+ ONLY_REF_SPLICE YES 197 45 0.21 0.89 GT 1.6895 AG 1.7465 0.1351 2473 0
EPB41L1--CHCHD6 16 0 16.00 0.00 EPB41L1^ENSG00000088367.23 24193 chr20:36198041:+ CHCHD6^ENSG00000159685.11 47911 chr3:126780340:+ ONLY_REF_SPLICE YES 197 30 0.09 0.55 GT 1.6895 AG 1.6895 0.054 2710 0
ATP11C--MCF2 83 0 83.00 0.00 ATP11C^ENSG00000101974.14 3132 chrX:139932016:- MCF2^ENSG00000101977.21 43910 chrX:139651788:- ONLY_REF_SPLICE YES 259 10 0.32 7.64 GT 1.8295 AG 1.8892 0.2803 1310 0
ATP11C--MCF2 4 0 4.00 0.00 ATP11C^ENSG00000101974.14 2579 chrX:139932569:- MCF2^ENSG00000101977.21 43910 chrX:139651788:- INCL_NON_REF_SPLICE YES 10 10 0.45 0.45 GT 1.7232 AG 1.8892 0.0135 1222 0
ATP11C--MCF2 3 0 3.00 0.00 ATP11C^ENSG00000101974.14 3132 chrX:139932016:- MCF2^ENSG00000101977.21 44979 chrX:139646903:- ONLY_REF_SPLICE YES 259 26 0.02 0.15 GT 1.8295 AG 1.5546 0.0101 2338 0
ATP11C--MCF2 1 0 1.00 0.00 ATP11C^ENSG00000101974.14 3132 chrX:139932016:- MCF2^ENSG00000101977.21 48621 chrX:139632454:- ONLY_REF_SPLICE YES 259 59 0.01 0.03 GT 1.8295 AG 1.5656 0.0034 2437 0
TLK2P1--AC110079.1 83 0 81.62 0.00 TLK2P1^ENSG00000226049.3 1830 chr17:34039043:- AC110079.1^ENSG00000260404.3 8316 chr4:118595912:+ INCL_NON_REF_SPLICE YES 44 29 1.87 2.80 GT 1.7465 AG 1.8892 0.2756 311 0
TLK2--FAM157A 71 0 69.38 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ FAM157A^ENSG00000236438.7 45187 chr3:198180755:+ ONLY_REF_SPLICE YES 367 75 0.20 0.95 GT 1.8892 AG 1.8892 0.2343 2733 0
TVP23C--CDRT4 68 0 68.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 73 5 0.93 11.50 GT 1.9329 AG 1.9899 0.2296 1215 0
TVP23C--CDRT4 47 0 47.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 113 5 0.42 8.00 GT 1.9086 AG 1.9899 0.1587 1774 0
TVP23C--CDRT4 20 0 20.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 73 23 0.28 0.88 GT 1.9329 AG 1.6402 0.0675 137 0
TVP23C--CDRT4 9 0 9.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 113 23 0.09 0.42 GT 1.9086 AG 1.6402 0.0304 697 0
TVP23C--CDRT4 3 0 3.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 18 5 0.21 0.67 GT 1.8892 AG 1.9899 0.0101 1949 0
TVP23C--CDRT4 1 0 1.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 18 23 0.11 0.08 GT 1.8892 AG 1.6402 0.0034 873 0
AC015911.9--SLFN12L 55 2 55.00 1.86 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000205045.11 6142 chr17:35480195:- ONLY_REF_SPLICE YES 0 54 58.00 1.05 GT 1.9329 AG 1.8892 0.192 533 0
AC015911.9--SLFN12L 27 0 27.00 0.00 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000286065.2 8152 chr17:35478185:- ONLY_REF_SPLICE YES 0 128 28.00 0.22 GT 1.9329 AG 1.9329 0.0912 1380 0
AC015911.9--SLFN12L 4 2 4.00 0.14 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000205045.11 4635 chr17:35487914:- INCL_NON_REF_SPLICE YES 0 0 7.00 7.00 GT 1.9329 AG 1.7819 0.014 1749 0
AC015911.9--SLFN12L 4 0 4.00 0.00 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000205045.11 9263 chr17:35475485:- ONLY_REF_SPLICE YES 0 91 5.00 0.05 GT 1.9329 AG 1.7968 0.0135 508 0
ARHGAP39--ZNF16 46 0 46.00 0.00 ARHGAP39^ENSG00000147799.11 1282 chr8:144605535:- ZNF16^ENSG00000170631.15 24711 chr8:144932590:- ONLY_REF_SPLICE YES 418 232 0.11 0.20 GT 1.9329 AG 1.9656 0.1553 1267 0
ARHGAP39--ZNF16 34 0 34.00 0.00 ARHGAP39^ENSG00000147799.11 2347 chr8:144581213:- ZNF16^ENSG00000170631.15 24711 chr8:144932590:- INCL_NON_REF_SPLICE YES 522 232 0.07 0.15 GT 1.8295 AG 1.9656 0.1148 248 0
GPBP1L1--PRDX1 43 0 43.00 0.00 GPBP1L1^ENSG00000159592.11 3538 chr1:45685576:- PRDX1^ENSG00000117450.15 26900 chr1:45519054:- ONLY_REF_SPLICE YES 2 1358 14.67 0.03 GT 1.6895 AG 1.8256 0.1452 110 0
GPBP1L1--PRDX1 9 0 9.00 0.00 GPBP1L1^ENSG00000159592.11 2702 chr1:45686412:- PRDX1^ENSG00000117450.15 26900 chr1:45519054:- ONLY_REF_SPLICE YES 2 1358 3.33 0.01 GT 1.3383 AG 1.8256 0.0304 837 0
GPBP1L1--PRDX1 5 0 5.00 0.00 GPBP1L1^ENSG00000159592.11 2121 chr1:45686993:- PRDX1^ENSG00000117450.15 26900 chr1:45519054:- ONLY_REF_SPLICE YES 1 1358 3.00 0.00 GT 1.9899 AG 1.8256 0.0169 1219 0
PDIA3--STRC 12 1 12.00 1.00 PDIA3^ENSG00000167004.13 1297 chr15:43746706:+ STRC^ENSG00000242866.10 19211 chr15:43618770:- INCL_NON_REF_SPLICE YES 2705 2 0.01 4.67 GT 1.5058 AG 1.7968 0.0439 2179 0
MED15--ATXN3 10 0 10.00 0.00 MED15^ENSG00000099917.17 15500 chr22:20566562:+ ATXN3^ENSG00000066427.24 42713 chr14:92071025:- INCL_NON_REF_SPLICE YES 631 35 0.02 0.31 GC 1.5850 AG 1.5850 0.0338 1 160
MED15--ATXN3 10 0 10.00 0.00 MED15^ENSG00000099917.17 15500 chr22:20566562:+ ATXN3^ENSG00000066427.24 42701 chr14:92071037:- INCL_NON_REF_SPLICE YES 631 41 0.02 0.26 GC 1.5850 AG 1.5656 0.0338 3 160
MED15--ATXN3 7 0 7.00 0.00 MED15^ENSG00000099917.17 15501 chr22:20566563:+ ATXN3^ENSG00000066427.24 42705 chr14:92071033:- INCL_NON_REF_SPLICE YES 646 40 0.01 0.20 CT 1.5656 AC 1.5850 0.0236 2 160
PCCA--NALCN-AS1 8 0 8.00 0.00 PCCA^ENSG00000175198.17 18934 chr13:100273346:+ NALCN-AS1^ENSG00000233009.1 41698 chr13:100740539:+ INCL_NON_REF_SPLICE YES 184 0 0.05 9.00 GT 1.7968 AG 1.8892 0.027 1150 0
PCCA--NALCN-AS1 5 0 5.00 0.00 PCCA^ENSG00000175198.17 18934 chr13:100273346:+ NALCN-AS1^ENSG00000233009.1 41716 chr13:100740557:+ ONLY_REF_SPLICE YES 184 0 0.03 6.00 GT 1.7968 AG 1.7056 0.0169 1148 0
PCCA--NALCN-AS1 2 0 2.00 0.00 PCCA^ENSG00000175198.17 18934 chr13:100273346:+ NALCN-AS1^ENSG00000233009.1 45041 chr13:101049280:+ ONLY_REF_SPLICE YES 184 0 0.02 3.00 GT 1.7968 AG 1.6895 0.0068 2759 0
PCCA--NALCN-AS1 1 0 1.00 0.00 PCCA^ENSG00000175198.17 18934 chr13:100273346:+ NALCN-AS1^ENSG00000233009.1 43921 chr13:101024679:+ ONLY_REF_SPLICE YES 184 0 0.01 2.00 GT 1.7968 AG 1.9656 0.0034 2419 0
ACTBP6--ACTB 3 0 3.00 0.00 ACTBP6^ENSG00000203413.3 1377 chr8:84948961:+ ACTB^ENSG00000075624.17 11160 chr7:5528705:- INCL_NON_REF_SPLICE YES 0 7915 4.00 0.00 CT 1.9329 AC 1.6402 0.0101 1 20
ACTBP6--ACTB 3 0 3.00 0.00 ACTBP6^ENSG00000203413.3 1383 chr8:84948967:+ ACTB^ENSG00000075624.17 10642 chr7:5529223:- INCL_NON_REF_SPLICE YES 0 11530 4.00 0.00 CA 1.9656 AG 1.7465 0.0101 51 16
54 rows