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Filename
659_cVw-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/659_cVw-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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9.1 KB
Workflow Run
dev_rna_exp09_10-73d51683
Published
Jun 08, 2026 4:43 AM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
STRN--ALK 860 3 860.00 3.00 STRN^ENSG00000115808.12 3485 chr2:36916078:- ALK^ENSG00000171094.18 59379 chr2:29223528:- ONLY_REF_SPLICE YES 1115 562 0.77 1.53 GT 1.9656 AG 1.9086 2.9132 2179 0
UPK3B--AC211486.3 296 17 296.00 13.63 UPK3B^ENSG00000243566.7 2358 chr7:76511882:+ AC211486.3^ENSG00000273598.1 9800 chr7:75327763:- INCL_NON_REF_SPLICE YES 118 8 2.64 34.89 GT 1.8295 AG 1.8892 1.0452 3993 0
UPK3B--AC211486.3 79 16 79.00 3.36 UPK3B^ENSG00000243566.7 2358 chr7:76511882:+ AC211486.3^ENSG00000273598.1 9805 chr7:75327758:- INCL_NON_REF_SPLICE YES 118 13 0.81 6.86 GT 1.8295 AG 1.9086 0.278 3993 0
UPK3B--AC211486.3 2 3 2.00 0.02 UPK3B^ENSG00000243566.7 2358 chr7:76511882:+ AC211486.3^ENSG00000273598.1 10940 chr7:75325729:- ONLY_REF_SPLICE YES 118 221 0.05 0.03 GT 1.8295 AG 1.8892 0.0069 4133 0
FBXO25--AC240565.1 225 0 225.00 0.00 FBXO25^ENSG00000147364.17 7247 chr8:435707:+ AC240565.1^ENSG00000280136.2 27298 chr17:106864:- ONLY_REF_SPLICE YES 354 41 0.64 5.38 GT 1.7819 AG 1.8892 0.7595 7162 0
AC005993.1--RGS6 205 5 205.00 2.65 AC005993.1^ENSG00000266869.2 1131 chr14:71848736:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 4 57 42.20 3.64 GT 1.9656 AG 1.9086 0.7009 4013 0
AC005993.1--RGS6 102 13 102.00 7.49 AC005993.1^ENSG00000266869.2 7910 chr14:71916030:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 0 57 116.00 2.00 GT 1.6402 AG 1.9086 0.3696 3057 0
AC005993.1--RGS6 47 10 47.00 2.01 AC005993.1^ENSG00000266869.2 4841 chr14:71908434:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 0 57 58.00 1.00 GT 1.8892 AG 1.9086 0.1655 1167 0
AC005993.1--RGS6 13 10 13.00 0.56 AC005993.1^ENSG00000266869.2 4837 chr14:71908430:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 0 57 24.00 0.41 GT 1.8892 AG 1.9086 0.0458 1167 0
AC005993.1--RGS6 8 5 8.00 0.10 AC005993.1^ENSG00000266869.2 3571 chr14:71869984:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 1 57 7.00 0.24 GT 1.8062 AG 1.9086 0.0273 1819 0
AC005993.1--RGS6 3 10 3.00 0.13 AC005993.1^ENSG00000266869.2 6755 chr14:71910652:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 0 57 14.00 0.24 GT 1.7465 AG 1.9086 0.0105 2118 0
AC005993.1--RGS6 3 1 3.00 0.01 AC005993.1^ENSG00000266869.2 1131 chr14:71848736:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 4 79 1.00 0.06 GT 1.9656 AG 1.8323 0.0101 3754 0
AC005993.1--RGS6 2 4 2.00 0.04 AC005993.1^ENSG00000266869.2 4841 chr14:71908434:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 0 79 7.00 0.09 GT 1.8892 AG 1.8323 0.0069 142 0
AC005993.1--RGS6 1 4 1.00 0.02 AC005993.1^ENSG00000266869.2 7910 chr14:71916030:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 0 79 6.00 0.07 GT 1.6402 AG 1.8323 0.0035 2045 0
TVP23C--CDRT4 168 1 168.00 0.98 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 188 22 0.90 7.39 GT 1.9329 AG 1.9899 0.5704 1215 0
TVP23C--CDRT4 51 0 51.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 680 22 0.08 2.26 GT 1.8323 AG 1.9899 0.1722 2126 0
TVP23C--CDRT4 39 0 39.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 188 87 0.21 0.45 GT 1.9329 AG 1.6402 0.1317 137 0
TVP23C--CDRT4 18 0 18.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 34 22 0.54 0.83 GT 1.8892 AG 1.9899 0.0608 1949 0
TVP23C--CDRT4 10 0 10.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 680 87 0.02 0.12 GT 1.8323 AG 1.6402 0.0338 1363 0
TVP23C--CDRT4 3 1 3.00 0.02 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 21051 chr17:15453085:- INCL_NON_REF_SPLICE YES 188 0 0.03 5.00 GT 1.9329 AG 1.8892 0.0102 1153 0
TVP23C--CDRT4 1 0 1.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 539 22 0.00 0.09 GT 1.9086 AG 1.9899 0.0034 1774 0
TVP23C--CDRT4 1 0 1.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 34 87 0.06 0.02 GT 1.8892 AG 1.6402 0.0034 873 0
STX16--NPEPL1 142 8 142.00 7.99 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 1197 73 0.13 2.04 GT 1.7968 AG 1.8256 0.5064 1940 0
STX16--NPEPL1 1 2 1.00 0.01 STX16^ENSG00000124222.22 7774 chr20:58671297:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE NO 1052 73 0.00 0.05 GT 1.8062 AG 1.8256 0.0034 2729 0
STX16--NPEPL1 1 0 1.00 0.00 STX16^ENSG00000124222.22 7774 chr20:58671297:+ NPEPL1^ENSG00000215440.12 19290 chr20:58693737:+ ONLY_REF_SPLICE YES 1052 1811 0.00 0.00 GT 1.8062 AG 1.7819 0.0034 1833 0
TLK2--AC240565.1 111 0 106.40 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 628 42 0.18 2.60 GT 1.8892 AG 1.8892 0.3592 1734 0
TLK2P1--AC110079.1 96 0 90.60 0.00 TLK2P1^ENSG00000226049.3 1830 chr17:34039043:- AC110079.1^ENSG00000260404.3 8316 chr4:118595912:+ INCL_NON_REF_SPLICE YES 65 73 1.47 1.31 GT 1.7465 AG 1.8892 0.3058 311 0
NIPBL--RAX 59 2 59.00 2.00 NIPBL^ENSG00000164190.19 1410 chr5:36877178:+ RAX^ENSG00000134438.10 57128 chr18:59269501:- ONLY_REF_SPLICE YES 148 98 0.42 0.63 GT 1.7968 AG 1.9656 0.206 357 0
PCDHA4--PCDHAC1 47 0 23.50 0.00 PCDHA4^ENSG00000204967.12 3644 chr5:140809572:+ PCDHAC1^ENSG00000248383.5 19813 chr5:140978949:+ ONLY_REF_SPLICE YES 34 13 1.37 3.43 GT 1.9656 AG 1.3996 0.0793 1304 0
PCDHA4--PCDHAC2 47 0 23.50 0.00 PCDHA4^ENSG00000204967.12 3644 chr5:140809572:+ PCDHAC2^ENSG00000243232.6 18677 chr5:140978949:+ ONLY_REF_SPLICE YES 34 89 1.37 0.53 GT 1.9656 AG 1.3996 0.0793 1213 0
AC015911.9--SLFN12L 43 4 43.00 4.00 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000205045.11 6142 chr17:35480195:- ONLY_REF_SPLICE YES 0 66 48.00 0.72 GT 1.9329 AG 1.8892 0.1587 533 0
AC015911.9--SLFN12L 13 0 13.00 0.00 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000286065.2 8152 chr17:35478185:- ONLY_REF_SPLICE YES 0 67 14.00 0.21 GT 1.9329 AG 1.9329 0.0439 1380 0
AC015911.9--SLFN12L 2 0 2.00 0.00 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000205045.11 9263 chr17:35475485:- ONLY_REF_SPLICE YES 0 85 3.00 0.03 GT 1.9329 AG 1.7968 0.0068 508 0
EPB41L1--CNBD2 39 3 39.00 2.87 EPB41L1^ENSG00000088367.23 16293 chr20:36182347:+ CNBD2^ENSG00000149646.12 57099 chr20:36008297:+ ONLY_REF_SPLICE YES 1080 9 0.04 4.30 GT 1.6729 AG 1.9329 0.1414 3161 0
EPB41L1--CNBD2 6 1 6.00 0.13 EPB41L1^ENSG00000088367.23 16293 chr20:36182347:+ CNBD2^ENSG00000149646.12 58277 chr20:36011137:+ ONLY_REF_SPLICE YES 1080 34 0.01 0.23 GT 1.6729 AG 1.9219 0.0207 2932 0
EPB41L1--CNBD2 6 0 6.00 0.00 EPB41L1^ENSG00000088367.23 16293 chr20:36182347:+ CNBD2^ENSG00000149646.12 60568 chr20:36030357:+ ONLY_REF_SPLICE YES 1080 34 0.01 0.20 GT 1.6729 AG 1.5850 0.0203 3712 0
EPB41L1--CNBD2 3 0 3.00 0.00 EPB41L1^ENSG00000088367.23 15217 chr20:36178672:+ CNBD2^ENSG00000149646.12 57099 chr20:36008297:+ ONLY_REF_SPLICE YES 1377 9 0.00 0.40 GT 1.7819 AG 1.9329 0.0101 4178 0
KLRC4--KLRK1 16 0 16.00 0.00 KLRC4^ENSG00000183542.5 3122 chr12:10407636:- KLRK1^ENSG00000213809.9 8583 chr12:10388875:- INCL_NON_REF_SPLICE YES 10 26 1.55 0.63 GT 1.3996 AG 1.9219 0.054 1207 0
SMG1P2--ZNF778 14 0 14.00 0.00 SMG1P2^ENSG00000205534.6 18067 chr16:29538195:- ZNF778^ENSG00000170100.14 33222 chr16:89224719:+ ONLY_REF_SPLICE YES 428 161 0.03 0.09 GT 1.9219 AG 1.8892 0.0473 1429 0
AL512590.2--CCDC180 11 1 11.00 1.00 AL512590.2^ENSG00000254633.2 10469 chr9:97294991:+ CCDC180^ENSG00000197816.16 14676 chr9:97307736:+ ONLY_REF_SPLICE YES 0 8 13.00 1.44 GT 1.9219 AG 1.8892 0.0405 1040 0
AL512590.2--CCDC180 1 0 1.00 0.00 AL512590.2^ENSG00000254633.2 9588 chr9:97294110:+ CCDC180^ENSG00000197816.16 14676 chr9:97307736:+ ONLY_REF_SPLICE YES 0 8 2.00 0.22 GT 1.6895 AG 1.8892 0.0034 393 0
AL512590.2--CCDC180 1 0 1.00 0.00 AL512590.2^ENSG00000254633.2 6719 chr9:97290902:+ CCDC180^ENSG00000197816.16 14676 chr9:97307736:+ ONLY_REF_SPLICE YES 0 8 2.00 0.22 GT 1.8892 AG 1.8892 0.0034 2800 0
DNM2--SMARCA4 9 1 9.00 0.64 DNM2^ENSG00000079805.18 1325 chr19:10718403:+ SMARCA4^ENSG00000127616.19 82637 chr19:11058255:+ ONLY_REF_SPLICE YES 4492 1183 0.00 0.01 GT 1.8892 AG 1.9329 0.0326 1537 0
DNM2--SMARCA4 5 1 5.00 0.36 DNM2^ENSG00000079805.18 1325 chr19:10718403:+ SMARCA4^ENSG00000127616.19 82640 chr19:11058258:+ ONLY_REF_SPLICE YES 4492 1194 0.00 0.01 GT 1.8892 AG 1.9656 0.0181 1536 0
NIPBL--CPLX4 9 0 9.00 0.00 NIPBL^ENSG00000164190.19 1410 chr5:36877178:+ CPLX4^ENSG00000166569.8 59368 chr18:59276734:- ONLY_REF_SPLICE YES 148 130 0.07 0.08 GT 1.7968 AG 1.9656 0.0304 1001 0
46 rows