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659_bGW-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/659_bGW-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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5.8 KB
Workflow Run
dev_rna_exp09_10-73d51683
Published
Jun 08, 2026 5:09 AM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
PTPRK--RSPO3 1449 7 1449.00 6.98 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 55391 chr6:127148648:+ ONLY_REF_SPLICE YES 587 333 2.48 4.36 GT 1.8892 AG 1.9329 4.9254 1100 0
PTPRK--RSPO3 4 7 4.00 0.02 PTPRK^ENSG00000152894.15 3698 chr6:128491732:- RSPO3^ENSG00000146374.14 55391 chr6:127148648:+ ONLY_REF_SPLICE YES 561 333 0.02 0.04 GT 1.7056 AG 1.9329 0.0136 1692 0
PTPRK--RSPO3 5 1 5.00 0.00 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 56583 chr6:127150426:+ ONLY_REF_SPLICE YES 587 1060 0.01 0.01 GT 1.8892 AG 1.9219 0.0169 125 0
PTPRK--RSPO3 1 0 1.00 0.00 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 58928 chr6:127195823:+ ONLY_REF_SPLICE YES 587 700 0.00 0.00 GT 1.8892 AG 0.9710 0.0034 1145 0
DLG5--KCNMA1 109 10 109.00 9.89 DLG5^ENSG00000151208.17 4880 chr10:77856730:- KCNMA1^ENSG00000156113.24 64024 chr10:77121048:- ONLY_REF_SPLICE YES 1533 515 0.08 0.23 GT 1.9656 AG 1.4566 0.4022 2614 0
DLG5--KCNMA1 15 1 15.00 0.11 DLG5^ENSG00000151208.17 3687 chr10:77869129:- KCNMA1^ENSG00000156113.24 64024 chr10:77121048:- ONLY_REF_SPLICE YES 1620 515 0.01 0.03 GT 1.9086 AG 1.4566 0.0511 1692 0
DLG5--KCNMA1 1 0 1.00 0.00 DLG5^ENSG00000151208.17 4880 chr10:77856730:- KCNMA1^ENSG00000156113.24 69859 chr10:77112442:- ONLY_REF_SPLICE YES 1533 633 0.00 0.00 GT 1.9656 AG 1.8256 0.0034 1077 0
DLG5--KCNMA1 1 0 1.00 0.00 DLG5^ENSG00000151208.17 1539 chr10:77926217:- KCNMA1^ENSG00000156113.24 64024 chr10:77121048:- ONLY_REF_SPLICE YES 1538 515 0.00 0.00 GT 1.4295 AG 1.4566 0.0034 1694 0
PCDHGA5--PCDHGA9 89 0 14.83 0.00 PCDHGA5^ENSG00000253485.2 3520 chr5:141366751:+ PCDHGA9^ENSG00000261934.2 11121 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 43 90.00 2.05 GT 1.8892 AG 1.3383 0.0502 1188 0
PCDHGA5--PCDHGB6 89 0 14.83 0.00 PCDHGA5^ENSG00000253485.2 3520 chr5:141366751:+ PCDHGB6^ENSG00000253305.2 13154 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 37 90.00 2.37 GT 1.8892 AG 1.3383 0.0502 1349 0
PCDHGA5--PCDHGB7 89 0 14.83 0.00 PCDHGA5^ENSG00000253485.2 3520 chr5:141366751:+ PCDHGB7^ENSG00000254122.3 11338 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 67 90.00 1.32 GT 1.8892 AG 1.3383 0.0502 1274 0
PCDHGA5--PCDHGC3 89 0 14.83 0.00 PCDHGA5^ENSG00000253485.2 3520 chr5:141366751:+ PCDHGC3^ENSG00000240184.7 11402 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 453 90.00 0.20 GT 1.8892 AG 1.3383 0.0502 1187 0
PCDHGA5--PCDHGC4 89 0 14.83 0.00 PCDHGA5^ENSG00000253485.2 3520 chr5:141366751:+ PCDHGC4^ENSG00000242419.5 11346 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 1 90.00 45.00 GT 1.8892 AG 1.3383 0.0502 1445 0
PCDHGA5--PCDHGC5 89 0 14.83 0.00 PCDHGA5^ENSG00000253485.2 3520 chr5:141366751:+ PCDHGC5^ENSG00000240764.4 11402 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 12 90.00 6.92 GT 1.8892 AG 1.3383 0.0502 1591 0
POLR2E--KEAP1 76 0 76.00 0.00 POLR2E^ENSG00000099817.12 1122 chr19:1095259:- KEAP1^ENSG00000079999.14 16737 chr19:10492262:- ONLY_REF_SPLICE YES 355 199 0.22 0.39 GT 1.8892 AG 1.7819 0.2571 213 0
WDR19--ATP8A1 76 0 76.00 0.00 WDR19^ENSG00000157796.18 5181 chr4:39194659:+ ATP8A1^ENSG00000124406.16 53992 chr4:42581732:- ONLY_REF_SPLICE YES 103 429 0.74 0.18 GT 1.8892 AG 1.8892 0.2571 1040 0
GPRC5A--RFC1 56 0 56.00 0.00 GPRC5A^ENSG00000013588.9 1106 chr12:12891664:+ RFC1^ENSG00000035928.16 20418 chr4:39327756:- ONLY_REF_SPLICE YES 439 362 0.13 0.16 GT 1.9086 AG 1.7465 0.1894 3600 0
GPRC5A--RFC1 1 0 1.00 0.00 GPRC5A^ENSG00000013588.9 1484 chr12:12892042:+ RFC1^ENSG00000035928.16 20418 chr4:39327756:- ONLY_REF_SPLICE YES 441 362 0.00 0.01 GT 1.8256 AG 1.7465 0.0034 3326 0
RFC1--GPRC5A 48 0 48.00 0.00 RFC1^ENSG00000035928.16 7678 chr4:39327524:- GPRC5A^ENSG00000013588.9 35674 chr12:12908243:+ ONLY_REF_SPLICE YES 240 511 0.20 0.10 GT 1.1589 AG 1.9899 0.1624 2525 0
RFC1--GPRC5A 2 0 2.00 0.00 RFC1^ENSG00000035928.16 7678 chr4:39327524:- GPRC5A^ENSG00000013588.9 38308 chr12:12912084:+ ONLY_REF_SPLICE YES 240 1946 0.01 0.00 GT 1.1589 AG 1.8256 0.0068 2521 0
GTF2A1L--STON1-GTF2A1L 20 0 20.00 0.00 GTF2A1L^ENSG00000242441.8 8867 chr2:48671680:+ STON1-GTF2A1L^ENSG00000068781.21 15563 chr2:48776280:+ ONLY_REF_SPLICE YES 43 13 0.48 1.50 GT 1.8256 AG 1.7819 0.0677 1034 0
GTF2A1L--STON1-GTF2A1L 3 0 3.00 0.00 GTF2A1L^ENSG00000242441.8 8867 chr2:48671680:+ STON1-GTF2A1L^ENSG00000068781.21 14402 chr2:48768961:+ INCL_NON_REF_SPLICE YES 43 0 0.09 4.00 GT 1.8256 AG 1.7819 0.0101 1686 0
PCDHA10--PCDHAC1 20 0 10.00 0.00 PCDHA10^ENSG00000250120.8 3554 chr5:140858436:+ PCDHAC1^ENSG00000248383.5 21506 chr5:140978949:+ INCL_NON_REF_SPLICE YES 3 6 5.25 3.00 GT 1.9329 AG 1.3996 0.0338 1105 0
PCDHA10--PCDHAC2 20 0 10.00 0.00 PCDHA10^ENSG00000250120.8 3554 chr5:140858436:+ PCDHAC2^ENSG00000243232.6 20370 chr5:140978949:+ INCL_NON_REF_SPLICE YES 3 16 5.25 1.24 GT 1.9329 AG 1.3996 0.0338 1235 0
CRYZL2P--SEC16B 16 0 16.00 0.00 CRYZL2P^ENSG00000242193.11 8825 chr1:178026155:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 1 13 8.50 1.21 GT 1.9086 AG 1.5546 0.0541 2589 0
DIP2B--PTRHD1 14 0 14.00 0.00 DIP2B^ENSG00000066084.13 3457 chr12:50640852:+ PTRHD1^ENSG00000184924.6 51526 chr2:24790581:- ONLY_REF_SPLICE YES 371 219 0.04 0.07 GT 1.9219 AG 1.8062 0.0474 4443 0
NDUFA9--C12orf4 13 1 13.00 1.00 NDUFA9^ENSG00000139180.11 3503 chr12:4654922:+ C12orf4^ENSG00000047621.12 39658 chr12:4491234:- ONLY_REF_SPLICE YES 464 98 0.03 0.15 GT 1.7465 AG 1.8892 0.0474 1550 0
BORCS5--LIMA1 7 1 7.00 1.00 BORCS5^ENSG00000165714.11 2576 chr12:12361349:+ LIMA1^ENSG00000050405.13 15769 chr12:50248774:- ONLY_REF_SPLICE YES 118 314 0.08 0.03 GT 1.9899 AG 1.7968 0.0271 2265 0
29 rows