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659_djb-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0009_exp0010/B23MHV2LT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/659_djb-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
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9.8 KB
Workflow Run
dev_rna_exp09_10-73d51683
Published
Jun 08, 2026 5:11 AM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
EWSR1--ATF1 735 0 735.00 0.00 EWSR1^ENSG00000182944.18 12735 chr22:29288786:+ ATF1^ENSG00000123268.9 31431 chr12:50809456:+ ONLY_REF_SPLICE YES 835 145 0.88 5.04 GT 1.7232 AG 1.3383 2.4773 395 0
EWSR1--ATF1 87 0 87.00 0.00 EWSR1^ENSG00000182944.18 11554 chr22:29287134:+ ATF1^ENSG00000123268.9 31431 chr12:50809456:+ ONLY_REF_SPLICE YES 1413 145 0.06 0.60 GT 1.8062 AG 1.3383 0.2932 1277 0
EWSR1--ATF1 31 0 31.00 0.00 EWSR1^ENSG00000182944.18 11554 chr22:29287134:+ ATF1^ENSG00000123268.9 32565 chr12:50814010:+ ONLY_REF_SPLICE YES 1413 459 0.02 0.07 GT 1.8062 AG 1.8892 0.1045 186 0
EWSR1--ATF1 12 0 12.00 0.00 EWSR1^ENSG00000182944.18 12704 chr22:29288755:+ ATF1^ENSG00000123268.9 32565 chr12:50814010:+ ONLY_REF_SPLICE YES 798 459 0.02 0.03 GT 1.6895 AG 1.8892 0.0404 982 0
EWSR1--ATF1 10 0 10.00 0.00 EWSR1^ENSG00000182944.18 12735 chr22:29288786:+ ATF1^ENSG00000123268.9 31432 chr12:50809457:+ INCL_NON_REF_SPLICE YES 835 147 0.01 0.07 GT 1.7232 GA 1.6402 0.0337 395 0
EWSR1--ATF1 6 0 6.00 0.00 EWSR1^ENSG00000182944.18 11553 chr22:29287133:+ ATF1^ENSG00000123268.9 31429 chr12:50809454:+ INCL_NON_REF_SPLICE YES 1419 140 0.00 0.05 AG 1.8062 AC 1.3383 0.0202 1279 0
EWSR1--ATF1 4 0 4.00 0.00 EWSR1^ENSG00000182944.18 13011 chr22:29289062:+ ATF1^ENSG00000123268.9 31431 chr12:50809456:+ ONLY_REF_SPLICE YES 879 145 0.01 0.03 GT 1.9656 AG 1.3383 0.0135 123 0
ATF1--EWSR1 608 1 608.00 0.98 ATF1^ENSG00000123268.9 6333 chr12:50796009:+ EWSR1^ENSG00000182944.18 29511 chr22:29292137:+ ONLY_REF_SPLICE YES 128 901 4.73 0.68 GT 1.9219 AG 1.9086 2.0525 1035 0
ATF1--EWSR1 23 0 23.00 0.00 ATF1^ENSG00000123268.9 6333 chr12:50796009:+ EWSR1^ENSG00000182944.18 31694 chr22:29296239:+ ONLY_REF_SPLICE YES 128 1199 0.19 0.02 GT 1.9219 AG 1.7232 0.0775 707 0
ATF1--EWSR1 8 1 8.00 0.01 ATF1^ENSG00000123268.9 7467 chr12:50809589:+ EWSR1^ENSG00000182944.18 23600 chr22:29282390:+ ONLY_REF_SPLICE YES 459 1068 0.02 0.01 GT 1.8256 AG 1.7819 0.027 1685 0
ATF1--EWSR1 6 1 6.00 0.01 ATF1^ENSG00000123268.9 7394 chr12:50809516:+ EWSR1^ENSG00000182944.18 26030 chr22:29288656:+ INCL_NON_REF_SPLICE YES 313 1778 0.03 0.00 TC 1.5628 AG 1.8892 0.0202 524 0
ATF1--EWSR1 4 0 4.00 0.00 ATF1^ENSG00000123268.9 4114 chr12:50780238:+ EWSR1^ENSG00000182944.18 29511 chr22:29292137:+ ONLY_REF_SPLICE YES 403 901 0.01 0.01 GT 1.9329 AG 1.9086 0.0135 1837 0
ATF1--EWSR1 4 0 4.00 0.00 ATF1^ENSG00000123268.9 4114 chr12:50780238:+ EWSR1^ENSG00000182944.18 31694 chr22:29296239:+ ONLY_REF_SPLICE YES 403 1199 0.01 0.00 GT 1.9329 AG 1.7232 0.0135 2225 0
PCDHA11--PCDHAC1 197 2 98.50 1.00 PCDHA11^ENSG00000249158.7 4312 chr5:140871494:+ PCDHAC1^ENSG00000248383.5 12566 chr5:140978949:+ INCL_NON_REF_SPLICE YES 18 8 10.53 22.22 GT 1.7819 AG 1.3996 0.3354 1419 0
PCDHA11--PCDHAC2 197 2 98.50 1.00 PCDHA11^ENSG00000249158.7 4312 chr5:140871494:+ PCDHAC2^ENSG00000243232.6 11430 chr5:140978949:+ INCL_NON_REF_SPLICE YES 18 14 10.53 13.33 GT 1.7819 AG 1.3996 0.3354 1466 0
PCDHGB2--PCDHGA10 176 0 22.00 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 296 177.00 0.60 GT 1.7819 AG 1.3383 0.0742 1890 0
PCDHGB2--PCDHGA11 176 0 22.00 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 106 177.00 1.65 GT 1.7819 AG 1.3383 0.0742 1018 0
PCDHGB2--PCDHGA12 176 0 22.00 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 29 177.00 5.90 GT 1.7819 AG 1.3383 0.0742 1413 0
PCDHGB2--PCDHGA8 176 0 22.00 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 16 177.00 10.41 GT 1.7819 AG 1.3383 0.0742 1419 0
PCDHGB2--PCDHGA9 176 0 22.00 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 44 177.00 3.93 GT 1.7819 AG 1.3383 0.0742 1493 0
PCDHGB2--PCDHGC3 176 0 22.00 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 860 177.00 0.21 GT 1.7819 AG 1.3383 0.0742 1210 0
PCDHGB2--PCDHGC4 176 0 22.00 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 2 177.00 59.00 GT 1.7819 AG 1.3383 0.0742 1585 0
PCDHGB2--PCDHGC5 176 0 22.00 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 1 177.00 88.50 GT 1.7819 AG 1.3383 0.0742 1206 0
PMS2P8--CCDC146 132 0 132.00 0.00 PMS2P8^ENSG00000273897.1 3705 chr7:73041421:+ CCDC146^ENSG00000135205.15 10191 chr7:77167658:+ ONLY_REF_SPLICE YES 37 12 3.50 10.23 GT 1.4566 AG 1.7465 0.4449 6786 0
PMS2P8--CCDC146 36 0 36.00 0.00 PMS2P8^ENSG00000273897.1 3705 chr7:73041421:+ CCDC146^ENSG00000135205.15 11358 chr7:77236947:+ ONLY_REF_SPLICE YES 37 47 0.97 0.77 GT 1.4566 AG 1.9329 0.1213 5731 0
PMS2P8--CCDC146 23 0 23.00 0.00 PMS2P8^ENSG00000273897.1 4794 chr7:73044560:+ CCDC146^ENSG00000135205.15 10191 chr7:77167658:+ ONLY_REF_SPLICE YES 64 12 0.37 1.85 GT 1.8323 AG 1.7465 0.0775 7283 0
PMS2P8--CCDC146 5 0 5.00 0.00 PMS2P8^ENSG00000273897.1 4794 chr7:73044560:+ CCDC146^ENSG00000135205.15 11358 chr7:77236947:+ ONLY_REF_SPLICE YES 64 47 0.09 0.12 GT 1.8323 AG 1.9329 0.0169 6311 0
PMS2P8--CCDC146 2 0 2.00 0.00 PMS2P8^ENSG00000273897.1 4794 chr7:73044560:+ CCDC146^ENSG00000135205.15 12441 chr7:77241691:+ ONLY_REF_SPLICE YES 64 34 0.05 0.09 GT 1.8323 AG 1.7465 0.0067 5479 0
TLK2P1--AC110079.1 128 0 118.49 0.00 TLK2P1^ENSG00000226049.3 1830 chr17:34039043:- AC110079.1^ENSG00000260404.3 8316 chr4:118595912:+ INCL_NON_REF_SPLICE YES 34 33 3.69 3.79 GT 1.7465 AG 1.8892 0.3994 311 0
TLK2--AL669831.1 118 0 107.51 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AL669831.1^ENSG00000228327.3 41389 chr1:774280:- ONLY_REF_SPLICE YES 335 121 0.35 0.98 GT 1.8892 AG 1.8892 0.3624 1623 0
STX16--NPEPL1 100 0 100.00 0.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 509 22 0.20 4.39 GT 1.7968 AG 1.8256 0.337 1940 0
STX16--NPEPL1 2 0 2.00 0.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 19290 chr20:58693737:+ ONLY_REF_SPLICE YES 509 982 0.01 0.00 GT 1.7968 AG 1.7819 0.0067 1248 0
STX16--NPEPL1 1 0 1.00 0.00 STX16^ENSG00000124222.22 7774 chr20:58671297:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 417 22 0.00 0.09 GT 1.8062 AG 1.8256 0.0034 2729 0
KCNAB2--GPBP1 55 0 55.00 0.00 KCNAB2^ENSG00000069424.15 8073 chr1:6026445:+ GPBP1^ENSG00000062194.16 51779 chr5:57246300:+ ONLY_REF_SPLICE YES 875 315 0.06 0.18 GT 1.9086 AG 1.8256 0.1854 1484 0
KCNAB2--GPBP1 6 0 6.00 0.00 KCNAB2^ENSG00000069424.15 6507 chr1:6018835:+ GPBP1^ENSG00000062194.16 51779 chr5:57246300:+ ONLY_REF_SPLICE YES 89 315 0.08 0.02 GT 1.9219 AG 1.8256 0.0202 72 2
AC092807.3--DDAH1 38 1 38.00 0.93 AC092807.3^ENSG00000282057.1 5553 chr1:85496166:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 21 40.00 1.82 GT 1.5628 AG 1.8062 0.1312 3011 0
AC092807.3--DDAH1 15 0 15.00 0.00 AC092807.3^ENSG00000282057.1 1267 chr1:85577984:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 21 16.00 0.73 GT 1.8062 AG 1.8062 0.0506 2484 0
AC092807.3--DDAH1 3 1 3.00 0.07 AC092807.3^ENSG00000282057.1 6990 chr1:85494729:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 21 5.00 0.23 GT 1.8062 AG 1.8062 0.0103 2313 0
PTK2--NKAIN3 35 0 35.00 0.00 PTK2^ENSG00000169398.19 25260 chr8:140789474:- NKAIN3^ENSG00000185942.13 65840 chr8:62579539:+ ONLY_REF_SPLICE YES 948 19 0.04 1.80 GT 1.8256 AG 1.9899 0.118 4346 0
TVP23C--CDRT4 34 0 34.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 51 3 0.67 8.75 GT 1.9329 AG 1.9899 0.1146 1215 0
TVP23C--CDRT4 24 0 24.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 210 3 0.12 6.25 GT 1.8323 AG 1.9899 0.0809 2126 0
TVP23C--CDRT4 17 0 17.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 66 3 0.27 4.50 GT 1.9086 AG 1.9899 0.0573 1774 0
TVP23C--CDRT4 11 0 11.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 51 7 0.23 1.50 GT 1.9329 AG 1.6402 0.0371 137 0
TVP23C--CDRT4 5 0 5.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 5 3 1.00 1.50 GT 1.8892 AG 1.9899 0.0169 1949 0
TVP23C--CDRT4 3 0 3.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 66 7 0.06 0.50 GT 1.9086 AG 1.6402 0.0101 697 0
AC138035.1--SEPTIN14 33 0 33.00 0.00 AC138035.1^ENSG00000238035.8 4834 chr5:181317395:+ SEPTIN14^ENSG00000154997.9 22965 chr7:55796092:- ONLY_REF_SPLICE YES 0 35 34.00 0.94 GT 1.9086 AG 1.9899 0.1112 1812 0
KAT6A--GSDMC 17 0 17.00 0.00 KAT6A^ENSG00000083168.11 3424 chr8:42048378:- GSDMC^ENSG00000147697.9 45853 chr8:129765793:- ONLY_REF_SPLICE YES 598 10 0.03 1.64 GT 1.6402 AG 1.9899 0.0573 2252 0
CFAP299--FGF5 14 0 14.00 0.00 CFAP299^ENSG00000197826.12 4482 chr4:80583183:+ FGF5^ENSG00000138675.16 28330 chr4:80301283:+ ONLY_REF_SPLICE YES 78 58 0.19 0.25 GT 1.7819 AG 1.6402 0.0472 2741 0
CFAP299--FGF5 4 0 4.00 0.00 CFAP299^ENSG00000197826.12 2281 chr4:80362884:+ FGF5^ENSG00000138675.16 28330 chr4:80301283:+ ONLY_REF_SPLICE YES 109 58 0.05 0.08 GT 1.6729 AG 1.6402 0.0135 1547 0
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