#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
EWSR1--ATF1	735	0	735.00	0.00	EWSR1^ENSG00000182944.18	12735	chr22:29288786:+	ATF1^ENSG00000123268.9	31431	chr12:50809456:+	ONLY_REF_SPLICE	YES	835	145	0.88	5.04	GT	1.7232	AG	1.3383	2.4773	395	0
EWSR1--ATF1	87	0	87.00	0.00	EWSR1^ENSG00000182944.18	11554	chr22:29287134:+	ATF1^ENSG00000123268.9	31431	chr12:50809456:+	ONLY_REF_SPLICE	YES	1413	145	0.06	0.60	GT	1.8062	AG	1.3383	0.2932	1277	0
EWSR1--ATF1	31	0	31.00	0.00	EWSR1^ENSG00000182944.18	11554	chr22:29287134:+	ATF1^ENSG00000123268.9	32565	chr12:50814010:+	ONLY_REF_SPLICE	YES	1413	459	0.02	0.07	GT	1.8062	AG	1.8892	0.1045	186	0
EWSR1--ATF1	12	0	12.00	0.00	EWSR1^ENSG00000182944.18	12704	chr22:29288755:+	ATF1^ENSG00000123268.9	32565	chr12:50814010:+	ONLY_REF_SPLICE	YES	798	459	0.02	0.03	GT	1.6895	AG	1.8892	0.0404	982	0
EWSR1--ATF1	10	0	10.00	0.00	EWSR1^ENSG00000182944.18	12735	chr22:29288786:+	ATF1^ENSG00000123268.9	31432	chr12:50809457:+	INCL_NON_REF_SPLICE	YES	835	147	0.01	0.07	GT	1.7232	GA	1.6402	0.0337	395	0
EWSR1--ATF1	6	0	6.00	0.00	EWSR1^ENSG00000182944.18	11553	chr22:29287133:+	ATF1^ENSG00000123268.9	31429	chr12:50809454:+	INCL_NON_REF_SPLICE	YES	1419	140	0.00	0.05	AG	1.8062	AC	1.3383	0.0202	1279	0
EWSR1--ATF1	4	0	4.00	0.00	EWSR1^ENSG00000182944.18	13011	chr22:29289062:+	ATF1^ENSG00000123268.9	31431	chr12:50809456:+	ONLY_REF_SPLICE	YES	879	145	0.01	0.03	GT	1.9656	AG	1.3383	0.0135	123	0
ATF1--EWSR1	608	1	608.00	0.98	ATF1^ENSG00000123268.9	6333	chr12:50796009:+	EWSR1^ENSG00000182944.18	29511	chr22:29292137:+	ONLY_REF_SPLICE	YES	128	901	4.73	0.68	GT	1.9219	AG	1.9086	2.0525	1035	0
ATF1--EWSR1	23	0	23.00	0.00	ATF1^ENSG00000123268.9	6333	chr12:50796009:+	EWSR1^ENSG00000182944.18	31694	chr22:29296239:+	ONLY_REF_SPLICE	YES	128	1199	0.19	0.02	GT	1.9219	AG	1.7232	0.0775	707	0
ATF1--EWSR1	8	1	8.00	0.01	ATF1^ENSG00000123268.9	7467	chr12:50809589:+	EWSR1^ENSG00000182944.18	23600	chr22:29282390:+	ONLY_REF_SPLICE	YES	459	1068	0.02	0.01	GT	1.8256	AG	1.7819	0.027	1685	0
ATF1--EWSR1	6	1	6.00	0.01	ATF1^ENSG00000123268.9	7394	chr12:50809516:+	EWSR1^ENSG00000182944.18	26030	chr22:29288656:+	INCL_NON_REF_SPLICE	YES	313	1778	0.03	0.00	TC	1.5628	AG	1.8892	0.0202	524	0
ATF1--EWSR1	4	0	4.00	0.00	ATF1^ENSG00000123268.9	4114	chr12:50780238:+	EWSR1^ENSG00000182944.18	29511	chr22:29292137:+	ONLY_REF_SPLICE	YES	403	901	0.01	0.01	GT	1.9329	AG	1.9086	0.0135	1837	0
ATF1--EWSR1	4	0	4.00	0.00	ATF1^ENSG00000123268.9	4114	chr12:50780238:+	EWSR1^ENSG00000182944.18	31694	chr22:29296239:+	ONLY_REF_SPLICE	YES	403	1199	0.01	0.00	GT	1.9329	AG	1.7232	0.0135	2225	0
PCDHA11--PCDHAC1	197	2	98.50	1.00	PCDHA11^ENSG00000249158.7	4312	chr5:140871494:+	PCDHAC1^ENSG00000248383.5	12566	chr5:140978949:+	INCL_NON_REF_SPLICE	YES	18	8	10.53	22.22	GT	1.7819	AG	1.3996	0.3354	1419	0
PCDHA11--PCDHAC2	197	2	98.50	1.00	PCDHA11^ENSG00000249158.7	4312	chr5:140871494:+	PCDHAC2^ENSG00000243232.6	11430	chr5:140978949:+	INCL_NON_REF_SPLICE	YES	18	14	10.53	13.33	GT	1.7819	AG	1.3996	0.3354	1466	0
PCDHGB2--PCDHGA10	176	0	22.00	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA10^ENSG00000253846.2	12051	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	296	177.00	0.60	GT	1.7819	AG	1.3383	0.0742	1890	0
PCDHGB2--PCDHGA11	176	0	22.00	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA11^ENSG00000253873.6	11222	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	106	177.00	1.65	GT	1.7819	AG	1.3383	0.0742	1018	0
PCDHGB2--PCDHGA12	176	0	22.00	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA12^ENSG00000253159.3	10305	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	29	177.00	5.90	GT	1.7819	AG	1.3383	0.0742	1413	0
PCDHGB2--PCDHGA8	176	0	22.00	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA8^ENSG00000253767.3	14069	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	16	177.00	10.41	GT	1.7819	AG	1.3383	0.0742	1419	0
PCDHGB2--PCDHGA9	176	0	22.00	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA9^ENSG00000261934.2	10157	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	44	177.00	3.93	GT	1.7819	AG	1.3383	0.0742	1493	0
PCDHGB2--PCDHGC3	176	0	22.00	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGC3^ENSG00000240184.7	10438	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	860	177.00	0.21	GT	1.7819	AG	1.3383	0.0742	1210	0
PCDHGB2--PCDHGC4	176	0	22.00	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGC4^ENSG00000242419.5	10382	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	2	177.00	59.00	GT	1.7819	AG	1.3383	0.0742	1585	0
PCDHGB2--PCDHGC5	176	0	22.00	0.00	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGC5^ENSG00000240764.4	10438	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	1	177.00	88.50	GT	1.7819	AG	1.3383	0.0742	1206	0
PMS2P8--CCDC146	132	0	132.00	0.00	PMS2P8^ENSG00000273897.1	3705	chr7:73041421:+	CCDC146^ENSG00000135205.15	10191	chr7:77167658:+	ONLY_REF_SPLICE	YES	37	12	3.50	10.23	GT	1.4566	AG	1.7465	0.4449	6786	0
PMS2P8--CCDC146	36	0	36.00	0.00	PMS2P8^ENSG00000273897.1	3705	chr7:73041421:+	CCDC146^ENSG00000135205.15	11358	chr7:77236947:+	ONLY_REF_SPLICE	YES	37	47	0.97	0.77	GT	1.4566	AG	1.9329	0.1213	5731	0
PMS2P8--CCDC146	23	0	23.00	0.00	PMS2P8^ENSG00000273897.1	4794	chr7:73044560:+	CCDC146^ENSG00000135205.15	10191	chr7:77167658:+	ONLY_REF_SPLICE	YES	64	12	0.37	1.85	GT	1.8323	AG	1.7465	0.0775	7283	0
PMS2P8--CCDC146	5	0	5.00	0.00	PMS2P8^ENSG00000273897.1	4794	chr7:73044560:+	CCDC146^ENSG00000135205.15	11358	chr7:77236947:+	ONLY_REF_SPLICE	YES	64	47	0.09	0.12	GT	1.8323	AG	1.9329	0.0169	6311	0
PMS2P8--CCDC146	2	0	2.00	0.00	PMS2P8^ENSG00000273897.1	4794	chr7:73044560:+	CCDC146^ENSG00000135205.15	12441	chr7:77241691:+	ONLY_REF_SPLICE	YES	64	34	0.05	0.09	GT	1.8323	AG	1.7465	0.0067	5479	0
TLK2P1--AC110079.1	128	0	118.49	0.00	TLK2P1^ENSG00000226049.3	1830	chr17:34039043:-	AC110079.1^ENSG00000260404.3	8316	chr4:118595912:+	INCL_NON_REF_SPLICE	YES	34	33	3.69	3.79	GT	1.7465	AG	1.8892	0.3994	311	0
TLK2--AL669831.1	118	0	107.51	0.00	TLK2^ENSG00000146872.18	17137	chr17:62560126:+	AL669831.1^ENSG00000228327.3	41389	chr1:774280:-	ONLY_REF_SPLICE	YES	335	121	0.35	0.98	GT	1.8892	AG	1.8892	0.3624	1623	0
STX16--NPEPL1	100	0	100.00	0.00	STX16^ENSG00000124222.22	8855	chr20:58673711:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	509	22	0.20	4.39	GT	1.7968	AG	1.8256	0.337	1940	0
STX16--NPEPL1	2	0	2.00	0.00	STX16^ENSG00000124222.22	8855	chr20:58673711:+	NPEPL1^ENSG00000215440.12	19290	chr20:58693737:+	ONLY_REF_SPLICE	YES	509	982	0.01	0.00	GT	1.7968	AG	1.7819	0.0067	1248	0
STX16--NPEPL1	1	0	1.00	0.00	STX16^ENSG00000124222.22	7774	chr20:58671297:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	417	22	0.00	0.09	GT	1.8062	AG	1.8256	0.0034	2729	0
KCNAB2--GPBP1	55	0	55.00	0.00	KCNAB2^ENSG00000069424.15	8073	chr1:6026445:+	GPBP1^ENSG00000062194.16	51779	chr5:57246300:+	ONLY_REF_SPLICE	YES	875	315	0.06	0.18	GT	1.9086	AG	1.8256	0.1854	1484	0
KCNAB2--GPBP1	6	0	6.00	0.00	KCNAB2^ENSG00000069424.15	6507	chr1:6018835:+	GPBP1^ENSG00000062194.16	51779	chr5:57246300:+	ONLY_REF_SPLICE	YES	89	315	0.08	0.02	GT	1.9219	AG	1.8256	0.0202	72	2
AC092807.3--DDAH1	38	1	38.00	0.93	AC092807.3^ENSG00000282057.1	5553	chr1:85496166:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	0	21	40.00	1.82	GT	1.5628	AG	1.8062	0.1312	3011	0
AC092807.3--DDAH1	15	0	15.00	0.00	AC092807.3^ENSG00000282057.1	1267	chr1:85577984:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	0	21	16.00	0.73	GT	1.8062	AG	1.8062	0.0506	2484	0
AC092807.3--DDAH1	3	1	3.00	0.07	AC092807.3^ENSG00000282057.1	6990	chr1:85494729:-	DDAH1^ENSG00000153904.21	16212	chr1:85358847:-	ONLY_REF_SPLICE	YES	0	21	5.00	0.23	GT	1.8062	AG	1.8062	0.0103	2313	0
PTK2--NKAIN3	35	0	35.00	0.00	PTK2^ENSG00000169398.19	25260	chr8:140789474:-	NKAIN3^ENSG00000185942.13	65840	chr8:62579539:+	ONLY_REF_SPLICE	YES	948	19	0.04	1.80	GT	1.8256	AG	1.9899	0.118	4346	0
TVP23C--CDRT4	34	0	34.00	0.00	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	INCL_NON_REF_SPLICE	YES	51	3	0.67	8.75	GT	1.9329	AG	1.9899	0.1146	1215	0
TVP23C--CDRT4	24	0	24.00	0.00	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	210	3	0.12	6.25	GT	1.8323	AG	1.9899	0.0809	2126	0
TVP23C--CDRT4	17	0	17.00	0.00	TVP23C^ENSG00000175106.17	6853	chr17:15545785:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	66	3	0.27	4.50	GT	1.9086	AG	1.9899	0.0573	1774	0
TVP23C--CDRT4	11	0	11.00	0.00	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	INCL_NON_REF_SPLICE	YES	51	7	0.23	1.50	GT	1.9329	AG	1.6402	0.0371	137	0
TVP23C--CDRT4	5	0	5.00	0.00	TVP23C^ENSG00000175106.17	12676	chr17:15516419:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	5	3	1.00	1.50	GT	1.8892	AG	1.9899	0.0169	1949	0
TVP23C--CDRT4	3	0	3.00	0.00	TVP23C^ENSG00000175106.17	6853	chr17:15545785:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	ONLY_REF_SPLICE	YES	66	7	0.06	0.50	GT	1.9086	AG	1.6402	0.0101	697	0
AC138035.1--SEPTIN14	33	0	33.00	0.00	AC138035.1^ENSG00000238035.8	4834	chr5:181317395:+	SEPTIN14^ENSG00000154997.9	22965	chr7:55796092:-	ONLY_REF_SPLICE	YES	0	35	34.00	0.94	GT	1.9086	AG	1.9899	0.1112	1812	0
KAT6A--GSDMC	17	0	17.00	0.00	KAT6A^ENSG00000083168.11	3424	chr8:42048378:-	GSDMC^ENSG00000147697.9	45853	chr8:129765793:-	ONLY_REF_SPLICE	YES	598	10	0.03	1.64	GT	1.6402	AG	1.9899	0.0573	2252	0
CFAP299--FGF5	14	0	14.00	0.00	CFAP299^ENSG00000197826.12	4482	chr4:80583183:+	FGF5^ENSG00000138675.16	28330	chr4:80301283:+	ONLY_REF_SPLICE	YES	78	58	0.19	0.25	GT	1.7819	AG	1.6402	0.0472	2741	0
CFAP299--FGF5	4	0	4.00	0.00	CFAP299^ENSG00000197826.12	2281	chr4:80362884:+	FGF5^ENSG00000138675.16	28330	chr4:80301283:+	ONLY_REF_SPLICE	YES	109	58	0.05	0.08	GT	1.6729	AG	1.6402	0.0135	1547	0