AIH curated blacklist: matched 6 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 265
Pass (FILTER=PASS): 61 (23.0%)
Fail (FILTER=FAIL): 204 (77.0%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 6
All 6 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 70
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 33
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 16
confidence_below_min(low<high): 15
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
total_reads_below_min(7.0<8.0): 2
Breakdown by confidence:
high: 61 pass, 6 fail (total: 67)
low: 0 pass, 108 fail (total: 108)
medium: 0 pass, 90 fail (total: 90)
Arriba filter: 265 rows -> 61 PASS; wrote 659_cTi-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_cTi-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_cTi-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filter_summary.txt